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NECEvent2014_5_4_scaffold_380_1

Organism: NECEvent2014_5_4_Enterobacter_cloacae_rel_56_24_partial

partial RP 4 / 55 BSCG 5 / 51 ASCG 5 / 38 MC: 1
Location: 1..3492

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=61645 species="Bacteria; Pro similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2274
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Enterobacter sp. MGH 16 RepID=V3SWE0_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2274
  • Evalue 0.0
  • rbh
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 999.99
  • Bit_score: 2272
  • Evalue 0.0

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Taxonomy

Enterobacter asburiae → Enterobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3492
TGCCCCAATACTGTTGGTATATCCATAAGAGACTCTGACATAGCCATGCCTGAACACTATCGTTATTCCTTGCCTGTCAAAGCGGGCGACCAGCGCCAGCTGGGTGAACTCACGGGCGCAGCGTGCGCCACGCTGGTGGCGGAAATTGCTGAGCGTCATCCTGGCCCGGTGATCCTGGTTGCCCCGGATATGCAAAACGCCCTGCGCCTGCACGATGAAATTCGCCAGTTCACCGATAATCTGGTGTTCAGCCTGGCCGACTGGGAAACGCTGCCCTATGACAGCTTCTCCCCGCACCAGGAGATCATCTCCTCACGCCTGTCGACGCTCTATCAACTCCCGACCATGCAGCGCGGCGTGCTGATTGTGCCGGTAAACACCCTGATGCAGCGCGTCTGCCCGCACAGCTACCTGCATGGCCATGCGCTGGTAATGAAAAAAGGCCAGCGCCTGTCCCGTGATGCCCTGCGGGCACAGCTTGACGGTGCCGGGTATCGCCACGTGGATCAGGTGATGGAGCACGGGGAATATGCGACCCGCGGCGCGCTGCTCGACCTTTACCCGATGGGCAGCGACCAGCCGTATCGTCTGGACTTTTTCGATGATGAAATCGACAGCCTGCGCGTCTTCGACGCCGATACGCAGCGCACGCTGGAGGAAGTGGAGTCCATCAATTTACTGCCCGCACATGAGTTCCCGACGGACAAAACCGCTATCGAACTGTTCCGCAGCCAGTGGCGCGATAAGTTCGAGGTGAAGCGCGACGCGGAACATATTTATCAACAGGTCAGCAAAGGCACGCTGCCTGCCGGGATCGAATACTGGCAGCCGCTGTTCTTCAGCGAGCCGTTGCCTGCCCTGTTCAGCTACTTCCCGGCGAATACGCTGATTGTTAACACCGGGGATATCGACGCCAGCGCCAGCCGCTTTGAAAGCGAAACCCGCGCTCGCTTCGAAAACCGGGGGGTTGACCCGATGCGTCCGCTGCTGCCGCCGGAAGCACTGTGGCTGCGTACCGACGAGCTCAACGCCGAGCTGAAGCGCTGGCCGCGCATGCAGCTGAAAACCGATTCGCTTGCCGATAAGGCCGCCAACACCAACCTCGCCTTCCGGACGCTGCCGGACCTGGCCGTCCAGGCGCAGCAGAAATCCCCGCTGGATAATCTGCGCAAGTTCCTGGAGTCCTTTACCGGCCCGGTGGTGTTCTCCGTTGAGAGTGAAGGCCGTCGCGAAGCGTTAGGTGAGCTGCTGGGACGCATTAAGGTGGCGCCGAAGCGCATCCTGCGCCTGAGCGAGGCGACCGGAAACGGCCGTTACCTGATGATTGGCGCCGCCGAGCATGGGTTCATCGACACGCTCAACAACCTGGCGCTGATTTGCGAAAGCGACCTGCTGGGCGAGCGCGTCGCGCGCCGTCGTCAGGACAGCCGTCGAACCATCAACCCGGACACGCTGATCCGCAACCTGGCCGAACTGCATCCGTGCCAGCCGATTGTGCACCTGGAGCATGGCGTTGGACGCTATCAGGGGATGACCACGCTGGAAGCGGGCGGCATTAAAGGTGAATACCTGATGCTGACCTACGCCAACGACGCCAAACTGTATGTCCCGGTGTCGTCCCTGCATCTGATCAGCCGCTACGCGGGCGGTGCCGAAGAGAACGCGCCGCTGCACAAGCTGGGCGGCGACGCCTGGGCGCGCGCGCGCCAGAAGGCCGCGGAAAAAGTGCGCGACGTGGCCGCCGAGCTGCTGGATATCTACGCCCAGCGCGCGGCCAAAGAGGGCTTCGCCTTTAAGCATGATAAGGAACAGTATCAGCTCTTCTGCGACAGCTTCCCGTTTGAAACCACGCCGGATCAGGCTCAGGCCATTAACGCCGTGCTGAGCGACATGTGCCAGCCGCTGGCAATGGACCGTTTAGTCTGCGGCGACGTCGGCTTCGGTAAAACCGAAGTGGCGATGCGCGCCGCCTTCCTTGCGGTTGAAAACAACAAGCAGGTAGCGGTGCTGGTGCCAACCACCCTGCTCGCTCAGCAGCACTTCGACAACTTCCGGGACCGTTTCGCCAACTGGCCGGTACGCATCGAGATGCTGTCGCGTTTTCGCAGCACCAAAGAGCAGACGCAGATCCTGGAGCAGGCAAGCGAAGGCAAGATCGATATTCTGATCGGCACCCATAAGCTGCTGCAAAGCGACGTGAAGTGGAAAGATCTGGGGCTGCTGATCGTCGACGAAGAGCACCGCTTCGGGGTGCGTCATAAAGAGCGCATCAAAGCGATGCGCGCCGACGTCGATATCCTGACCCTGACCGCGACGCCAATCCCGAGAACCCTGAACATGGCGATGAGCGGCATGCGCGATCTGTCGATTATTGCCACGCCGCCGGCGCGCCGTCTGGCGGTAAAAACCTTCGTCCGCGAATACGATAATCTGGTGGTGCGTGAGGCCATTCTGCGTGAAGTGCTGCGCGGGGGTCAGGTCTATTACCTGTACAACGACGTGGAAAACATCCAGAAAGCGGCCGACAGGCTGGCGGAGCTGGTGCCGGAAGCGCGCATTGCTATCGGTCACGGGCAGATGCGCGAGCGCGAGCTGGAACGGGTGATGAACGACTTCCACCATCAGCGCTTTAACGTGCTGGTGTGCACCACCATCATCGAAACCGGGATCGACATTCCGACGGCGAACACCATCATCATTGAACGTGCGGATCACTTTGGCCTGGCGCAGCTTCACCAGCTGCGTGGCCGCGTCGGGCGTTCGCACCATCAGGCCTACGCCTGGCTGCTGACGCCGCATCCGAAAGCGATGACCACCGATGCGCAAAAGCGTCTGGAAGCCATCGCCTCGCTGGAAGACCTCGGCGCAGGCTTCGCGCTGGCCACGCACGATCTCGAGATCCGCGGTGCCGGTGAACTGCTGGGTGAGGACCAGAGCGGCTCGATGGAGACCATCGGCTTCTCGCTCTATATGGAGCTGCTTGAGAACGCGGTTGATGCCCTGAAGGCCGGGCGCGAGCCGTCGCTGGAAGATCTCACCAGCCAGCAGACCGAGGTAGAGCTGCGCATGCCTTCCCTGCTGCCGGACGATTTCATTCCGGATGTAAATACCCGCCTGTCGTTCTACAAGCGCATCGCCAGCGCGAAGACGGAAAACGAGCTGGAAGAGATTAAAGTTGAGCTGATCGACCGCTTTGGTCTGCTGCCCGATGCGGCGCGAAATCTGCTGGATATCGCGCGCCTGCGCCAGCAGGCGCAGAAGCTGGGCATTCGCAAGCTTGAAGGCAACGAAAAAGGCGGCGTGATTGAGTTCGCCGAGAAGAACCACGTCAACCCGATGTGGCTCATCGGTCTGCTGCAAAAACAGCCGCAGCATTTCCGTCTGGATGGCCCAACGCGTCTCAAATTTACCCAGGAGCTGACGGAGCGCAAAACCCGCATGGACTGGGTGCGTAACTTTATGCGCCAGCTGGAAGAGAATGCGATCGCATAA
PROTEIN sequence
Length: 1164
CPNTVGISIRDSDIAMPEHYRYSLPVKAGDQRQLGELTGAACATLVAEIAERHPGPVILVAPDMQNALRLHDEIRQFTDNLVFSLADWETLPYDSFSPHQEIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSYLHGHALVMKKGQRLSRDALRAQLDGAGYRHVDQVMEHGEYATRGALLDLYPMGSDQPYRLDFFDDEIDSLRVFDADTQRTLEEVESINLLPAHEFPTDKTAIELFRSQWRDKFEVKRDAEHIYQQVSKGTLPAGIEYWQPLFFSEPLPALFSYFPANTLIVNTGDIDASASRFESETRARFENRGVDPMRPLLPPEALWLRTDELNAELKRWPRMQLKTDSLADKAANTNLAFRTLPDLAVQAQQKSPLDNLRKFLESFTGPVVFSVESEGRREALGELLGRIKVAPKRILRLSEATGNGRYLMIGAAEHGFIDTLNNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHPCQPIVHLEHGVGRYQGMTTLEAGGIKGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWARARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDKEQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENNKQVAVLVPTTLLAQQHFDNFRDRFANWPVRIEMLSRFRSTKEQTQILEQASEGKIDILIGTHKLLQSDVKWKDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDNLVVREAILREVLRGGQVYYLYNDVENIQKAADRLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDAARNLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAEKNHVNPMWLIGLLQKQPQHFRLDGPTRLKFTQELTERKTRMDWVRNFMRQLEENAIA*