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NECEvent2014_5_5_scaffold_1733_2

Organism: NECEvent2014_5_5_Eggerthella_1_3_56FAA-rel_64_4_v_partial

partial RP 21 / 55 BSCG 20 / 51 ASCG 4 / 38 MC: 1
Location: comp(120..1493)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN n=3 Tax=Bacteria RepID=C8WN98_EGGLE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 457.0
  • Bit_score: 902
  • Evalue 1.60e-259
  • rbh
RNA polymerase sigma 54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 457.0
  • Bit_score: 902
  • Evalue 4.40e-260
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EGC88369.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HG similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 457.0
  • Bit_score: 902
  • Evalue 2.20e-259

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Taxonomy

Eggerthella sp. HGA1 → Eggerthella → Eggerthellales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
TCGGTGCGGACCAAGCAGCATTTCGCTCCCACGGCCATCCAGGGCCTCGAGGTGCTGTCGCTGCCGGTCGCGCGCCTGGACGCGTACGTGCGCGACCTGGTGGAGCGCAACCCCTTGCTCGATTTCGACTACGATCACGGTTCCCTCTCGTTCGAGGAGCTGCCCGACGAGGAGGACGGCGACGCTGCGGCCGATGCCGAAACGGCTGCCGAGGGGTTCGATGCGCGCCCGCCGTCGGCGATCGCCTGGGATGCCCGCGGGTTCGACCTGGCCCGTCTGCGCGACGAGTGCTCTCAAACGGAAACGCTGCACAGCCATGTGCGCATGCAGCTGACGGGCGTGCGCGTCGGCGAAGAGGACCGCGCTCTGCTCGACGCCCTTATCGAGAACATCGACGACGACGGGTACTTCTCCGGCAGCATGCATGCGCTCTGCGCCGAAGCGGGGCGCTCGATAGAGGACGGCCAGCGGCTGCTCGAGCTCGTGCAGCAGCTGTCGCCTCGCGGCGTGGGCGCGCGCGATCTGGCCGAATGCCTTGCGCTGCAAATCGACGACGGCCTTCCCTATGCGGACGTGATTCGCGACATGCTGCGCACCGGGCTGGACGACCTCGCCGAAAACCGCACGACGAAGCTCATGCGCGTCTACCATTTGACCATCGACGACCTTGCCGCCATCCGCGAGGTCATCTGCACGCTCGACCCTCGCCCGGGCTCGTCTTTCTCGCAGCGCAAGGGCACCGTGTACGTCATCCCCGACATCACCATCAGGCGCGATGGCACGGCCTTCTCGGTGCAGGTTACCGGCGAGCTGTCGGAAACGCTGGTGCTCAACGGATCCTACGACCGCATGGAGCAGCGCGGGGGCATGGACGACGAGGCGCGGGAGTGGCTGCACGAGAAGCGCGCCGAGGCGGATGCAGCGCTGGCGAACATCGACCAACGGCGCCAGACGCTCCATCGGTTCGGCGTGTATCTGGCCGAGGTCCAATACGATTTCTTCATGGGCGGCGAGGCGCGGATGCGCCCGCTCACCATGCAGCAGGCCGCCGATGCGCTGGGCGTGCATGTGTCCACCATCAGCCGCACGGTGCAGGACAAGTACGCCCTCACCCCGTGGGGCGTGTTCCCGCTCAAGCACTTCTTCTCAAGTTCGGTCGCCTGCACGGCCGAGGAGCGCCGCCATGCGCTGTCGTCGCTTGCCATCAAAGACCGCATCAAAGACCTGGTGGCCCAAGAGGACCGTCGCACGCCTTTGAGCGACGCGACGATCACCGCCATCCTGAACGGCGAGGGCGTGGACATCAAACGGCGAACCGTGGCGAAGTACCGCGAGGCGCTGGGCATCGGCCGGCAGTCGCAGCGAAGACGGTAA
PROTEIN sequence
Length: 458
SVRTKQHFAPTAIQGLEVLSLPVARLDAYVRDLVERNPLLDFDYDHGSLSFEELPDEEDGDAAADAETAAEGFDARPPSAIAWDARGFDLARLRDECSQTETLHSHVRMQLTGVRVGEEDRALLDALIENIDDDGYFSGSMHALCAEAGRSIEDGQRLLELVQQLSPRGVGARDLAECLALQIDDGLPYADVIRDMLRTGLDDLAENRTTKLMRVYHLTIDDLAAIREVICTLDPRPGSSFSQRKGTVYVIPDITIRRDGTAFSVQVTGELSETLVLNGSYDRMEQRGGMDDEAREWLHEKRAEADAALANIDQRRQTLHRFGVYLAEVQYDFFMGGEARMRPLTMQQAADALGVHVSTISRTVQDKYALTPWGVFPLKHFFSSSVACTAEERRHALSSLAIKDRIKDLVAQEDRRTPLSDATITAILNGEGVDIKRRTVAKYREALGIGRQSQRRR*