ggKbase home page

NECEvent2014_5_5_scaffold_1860_1

Organism: NECEvent2014_5_5_Eggerthella_1_3_56FAA-rel_64_4_v_partial

partial RP 21 / 55 BSCG 20 / 51 ASCG 4 / 38 MC: 1
Location: 2..280

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Clostridium difficile F501 RepID=T4B343_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 185
  • Evalue 2.60e-44
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 185
  • Evalue 7.20e-45
Sigma-70 region 2 {ECO:0000313|EMBL:EGC90098.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 185
  • Evalue 3.60e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eggerthella sp. HGA1 → Eggerthella → Eggerthellales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 279
TGCAAGGACATGCTCAAGGCCGCATCCCGTCGCGCGGTGTCGCTCGACGACGCGGTTTGCGCAGCTTCGAACGACCCGGCCACGCAGCCCGCATCGTTCTCCAGCGAGGTGGTGGACGCCATGCGTTCCCTTGACGATCCCCCTCGCACTCCCTTGTATCTTTCTCTGTACGAGGGTTATACCGCTCCGGAGATCGCGCAGATGGTGGATGCTCCCGTGAACACGGTGTACTCATGGCTCGCGCGAGGCAAGAAGCAATTGCAGGAGGTGCTGTCATGA
PROTEIN sequence
Length: 93
CKDMLKAASRRAVSLDDAVCAASNDPATQPASFSSEVVDAMRSLDDPPRTPLYLSLYEGYTAPEIAQMVDAPVNTVYSWLARGKKQLQEVLS*