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NECEvent2014_5_5_scaffold_88_27

Organism: NECEvent2014_5_5_Enterobacteriales_53_83_partial

partial RP 24 / 55 MC: 1 BSCG 19 / 51 ASCG 7 / 38 MC: 1
Location: 27809..28114

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IQI1_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 101.0
  • Bit_score: 198
  • Evalue 4.20e-48
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; K similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 101.0
  • Bit_score: 199
  • Evalue 2.00e-48
hfq; RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 101.0
  • Bit_score: 196
  • Evalue 3.40e-48

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Taxonomy

Kluyvera ascorbata → Kluyvera → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCAATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATTGAGTCTTTCGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTCTACAAGCATGCTATTTCTACTGTTGTTCCGTCTCGCCCGGTTTCTCATCATAGCAATAACGCGGGCGGCGGCACTGGCAGTAACTACCATCACGGTAGCAATGCTCAGTCCTCTGCGCAGCAGGACAGCGAAGAAACCGAATAA
PROTEIN sequence
Length: 102
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTGSNYHHGSNAQSSAQQDSEETE*