ggKbase home page
Advanced Search
Search Help

NECEvent2014_5_5_Enterobacteriales_53_83_partial

NECEvent2014_5_5_Enterobacteriales_53_25
In projects: NECEvent2014_5_5

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_5_5_UNK

Properties

Avg. coverage: 25.28 Longest contig: 257.10 Kbp Bin length: 4.19 Mbp GC content: 52.81 %
Contigs count: 228 Features count: 4262 rRNAs count: 0 tRNAs count: 68

Genome completeness

partial RP 24 / 55 MC: 1 BSCG 19 / 51 ASCG 7 / 38 MC: 1
Displaying items 51-100 of 228 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_5_scaffold_225 175_004_scaffold_225
Species: Leclercia adecarboxylata (77.78%)
9 15053 bp 55.04 13.23 89.36
NECEvent2014_5_5_scaffold_81 175_004_scaffold_81
Order: Enterobacteriales (96.15%)
26 29231 bp 53.89 13.25 86.73
NECEvent2014_5_5_scaffold_52 175_004_scaffold_52
Order: Enterobacteriales (85.37%)
41 36026 bp 52.55 13.41 84.81
NECEvent2014_5_5_scaffold_351 175_004_scaffold_351
Order: Enterobacteriales (92.31%)
13 10611 bp 51.54 13.54 85.30
NECEvent2014_5_5_scaffold_604 175_004_scaffold_604
Species: Escherichia coli (83.33%)
6 6065 bp 45.79 13.55 94.82
NECEvent2014_5_5_scaffold_60 175_004_scaffold_60
Order: Enterobacteriales (89.66%)
29 32772 bp 52.07 13.72 89.45
NECEvent2014_5_5_scaffold_241 175_004_scaffold_241
Order: Enterobacteriales (100%)
14 14278 bp 55.30 13.91 91.67
NECEvent2014_5_5_scaffold_761 175_004_scaffold_761
Order: Enterobacteriales (80%)
5 4626 bp 52.53 14.01 85.86
NECEvent2014_5_5_scaffold_21 175_004_scaffold_21
Order: Enterobacteriales (95.65%)
69 66831 bp 53.57 14.08 85.29
NECEvent2014_5_5_scaffold_70 175_004_scaffold_70
Order: Enterobacteriales (94.74%)
38 31086 bp 50.90 14.10 91.52
NECEvent2014_5_5_scaffold_616 175_004_scaffold_616
Genus: Enterobacter (61.54%)
13 5912 bp 48.09 14.21 79.11
NECEvent2014_5_5_scaffold_557 175_004_scaffold_557
Order: Enterobacteriales (100%)
5 6666 bp 55.55 14.22 96.31
NECEvent2014_5_5_scaffold_209 175_004_scaffold_209
Order: Enterobacteriales (92.86%)
14 15774 bp 53.28 14.29 95.76
NECEvent2014_5_5_scaffold_0 175_004_scaffold_0
Order: Enterobacteriales (93.5%)
277 257105 bp 52.18 14.32 88.09
NECEvent2014_5_5_scaffold_31 175_004_scaffold_31
Order: Enterobacteriales (89.58%)
48 50454 bp 54.98 14.34 92.13
NECEvent2014_5_5_scaffold_107 175_004_scaffold_107
Order: Enterobacteriales (89.66%)
29 25011 bp 52.99 14.37 81.63
NECEvent2014_5_5_scaffold_1301 175_004_scaffold_1301
Species: Escherichia coli (50%)
2 2166 bp 53.14 14.40 91.00
NECEvent2014_5_5_scaffold_628 175_004_scaffold_628
Species: Kosakonia radicincitans (50%)
6 5741 bp 54.76 14.45 89.72
NECEvent2014_5_5_scaffold_124 175_004_scaffold_124
Order: Enterobacteriales (92.86%)
14 23648 bp 55.10 14.54 88.90
NECEvent2014_5_5_scaffold_909 175_004_scaffold_909
Species: Escherichia coli (50%)
6 3726 bp 43.72 14.73 95.65
NECEvent2014_5_5_scaffold_23 175_004_scaffold_23
Order: Enterobacteriales (96.36%)
55 63780 bp 52.99 14.89 88.58
NECEvent2014_5_5_scaffold_240 175_004_scaffold_240
Order: Enterobacteriales (78.95%)
19 20299 bp 53.53 15.12 85.84
NECEvent2014_5_5_scaffold_385 175_004_scaffold_385
Species: Klebsiella oxytoca (55.56%)
9 9684 bp 49.49 15.12 82.13
NECEvent2014_5_5_scaffold_481 175_004_scaffold_481
Order: Enterobacteriales (88.89%)
9 7772 bp 52.77 15.25 89.85
NECEvent2014_5_5_scaffold_541 175_004_scaffold_541
Order: Enterobacteriales (87.5%)
8 6867 bp 43.32 15.27 64.26
NECEvent2014_5_5_scaffold_242 175_004_scaffold_242
Species: Escherichia coli (71.43%)
21 14205 bp 51.74 15.35 93.37
NECEvent2014_5_5_scaffold_43 175_004_scaffold_43
Order: Enterobacteriales (100%)
36 39515 bp 55.78 15.35 89.68
NECEvent2014_5_5_scaffold_716 175_004_scaffold_716
Genus: Klebsiella (66.67%)
3 5004 bp 54.48 15.38 68.82
NECEvent2014_5_5_scaffold_756 175_004_scaffold_756
Order: Enterobacteriales (100%)
5 4655 bp 52.20 15.60 63.35
NECEvent2014_5_5_scaffold_1133 175_004_scaffold_1133
Species: Leclercia adecarboxylata (50%)
2 2660 bp 50.75 15.73 83.01
NECEvent2014_5_5_scaffold_1062 175_004_scaffold_1062
Order: Enterobacteriales (50%)
6 2944 bp 48.00 15.79 78.06
NECEvent2014_5_5_scaffold_167 175_004_scaffold_167
Species: Leclercia adecarboxylata (60%)
25 18670 bp 55.40 15.92 93.37
NECEvent2014_5_5_scaffold_65 175_004_scaffold_65
Order: Enterobacteriales (92.86%)
28 32007 bp 56.31 16.03 92.53
NECEvent2014_5_5_scaffold_2484 175_004_scaffold_2484
Species: Enterobacter cloacae (100%)
1 1047 bp 45.56 16.05 72.78
NECEvent2014_5_5_scaffold_206 175_004_scaffold_206
Order: Enterobacteriales (100%)
11 15893 bp 53.90 16.09 88.02
NECEvent2014_5_5_scaffold_8 175_004_scaffold_8
Order: Enterobacteriales (91.76%)
85 94673 bp 53.60 16.11 89.85
NECEvent2014_5_5_scaffold_1326 175_004_scaffold_1326
Order: Enterobacteriales (100%)
4 2108 bp 51.28 16.15 83.11
NECEvent2014_5_5_scaffold_460 175_004_scaffold_460
Order: Enterobacteriales (75%)
12 8082 bp 49.03 16.15 84.19
NECEvent2014_5_5_scaffold_158 175_004_scaffold_158
Order: Enterobacteriales (100%)
20 19923 bp 54.29 16.19 89.04
NECEvent2014_5_5_scaffold_71 175_004_scaffold_71
Order: Enterobacteriales (75.86%)
29 30998 bp 53.42 16.28 86.02
NECEvent2014_5_5_scaffold_425 175_004_scaffold_425
Order: Enterobacteriales (60%)
10 8640 bp 46.16 16.41 86.40
NECEvent2014_5_5_scaffold_14 175_004_scaffold_14
Order: Enterobacteriales (100%)
64 75222 bp 52.87 16.42 91.43
NECEvent2014_5_5_scaffold_266 175_004_scaffold_266
Order: Enterobacteriales (93.33%)
15 13190 bp 48.29 16.43 82.02
NECEvent2014_5_5_scaffold_318 175_004_scaffold_318
Species: Enterobacter cloacae (62.5%)
16 11441 bp 54.91 16.44 86.43
NECEvent2014_5_5_scaffold_479 175_004_scaffold_479
Genus: Enterobacter (50%)
10 7783 bp 53.71 16.50 88.77
NECEvent2014_5_5_scaffold_625 175_004_scaffold_625
Species: Leclercia adecarboxylata (57.14%)
7 5789 bp 50.23 16.51 83.71
NECEvent2014_5_5_scaffold_458 175_004_scaffold_458
Order: Enterobacteriales (92.31%)
13 8115 bp 49.32 16.78 81.06
NECEvent2014_5_5_scaffold_254 175_004_scaffold_254
Order: Enterobacteriales (100%)
16 13678 bp 52.28 16.83 88.87
NECEvent2014_5_5_scaffold_121 175_004_scaffold_121
Genus: Klebsiella (51.85%)
27 24148 bp 44.76 16.86 88.28
NECEvent2014_5_5_scaffold_464 175_004_scaffold_464
Order: Enterobacteriales (80%)
10 8022 bp 50.80 16.94 86.23
Displaying items 51-100 of 228 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.