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NECEvent2014_5_6_scaffold_2507_1

Organism: NECEvent2014_5_6_Clostridium_perfringens_30_4_partial

partial RP 23 / 55 BSCG 20 / 51 ASCG 8 / 38
Location: 1..588

Top 3 Functional Annotations

Value Algorithm Source
Cell envelope-related transcriptional attenuator domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNI9_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 378
  • Evalue 3.40e-102
  • rbh
cell envelope-related function transcriptional attenuator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 378
  • Evalue 9.50e-103
Membrane-bound protein {ECO:0000313|EMBL:EIA16325.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 192.0
  • Bit_score: 377
  • Evalue 1.00e-101

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 588
GATAAGGTTTTATCAGTATCTACCATAACAAAGATAGATAGTATAGCAGAGATTTTAAATAAAAATATAGAAACTAATATTCCTTTAGATGTTACTGTTGCATATGGACTTAAAGGATTAGAGACTGATAAGAATAATATAAAAATGATGACTTTACCTGGAGAAGGTAAATATGTTGGAAATGTTTCTTATTATATTCCTGATGAAAAGGCTACTAAAGAATTAAGAAGTCAATTAAACAGTAGTAATTTAAGTGGAAGAAAAAATGTTATTCCTAGTGCTGCTAGAGGAGATTTATCCATAAAAGTTTTAAATTGCACAAAAATAAATGGCTTAGCTGCAAATGTACAAAAACAATTAAATGAAAACGGATATGATAAAGTTGATGTTGGAAATGGAGATCCAAGAGAAAAATCAGAGATTTTGATAAAGGATGAAAGTTCTAGAGCTTTTATGGAAAATGATTTAAAGATAGAGAATATTAAAAAGGGCATTTCATCTAAGTATGATGGAAATGGAACTTATGATGTAGTAATATTACTAGGAAAAGACTTTAAAAATTTCGGAGAGATGAAATGAGTATTTTAG
PROTEIN sequence
Length: 196
DKVLSVSTITKIDSIAEILNKNIETNIPLDVTVAYGLKGLETDKNNIKMMTLPGEGKYVGNVSYYIPDEKATKELRSQLNSSNLSGRKNVIPSAARGDLSIKVLNCTKINGLAANVQKQLNENGYDKVDVGNGDPREKSEILIKDESSRAFMENDLKIENIKKGISSKYDGNGTYDVVILLGKDFKNFGEMK*VF*