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NECEvent2014_5_6_scaffold_301_9

Organism: NECEvent2014_5_6_Propionibacterium_HGH0353-rel_64_7

near complete RP 51 / 55 MC: 5 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(12204..16085)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2546
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 999.99
  • Bit_score: 2543
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X7X7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2548
  • Evalue 0.0
  • rbh

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3882
GTGCTGGACACCAACTACTACGACCGGTTGCAGATCGGCCTGGCCACGGCCGACCAGATCCGTGCGTGGAGCCACGGCGAGGTCAAGAAGCCCGAGACCATCAACTACCGCACCCTCAAGCCCGAGCGTGACGGCCTCTTCTGCGAGAAGATCTTCGGCCCGACCCGTGACTGGGAGTGCTACTGCGGCAAGTACAAGCGCGTCCGCTTCAAGGGCATCATCTGTGAGCGCTGTGGCGTCGAGGTGACCCGTTCCAACGTGCGTCGTGAGCGCATGGGACACATCGAGCTGGTCGCCCCGGTGACCCACATCTGGTACTTCAAGGGAGTTCCCTCCCGTCTGGGTTACCTGCTCGACATTGCCCCGAAGGACCTCGAGAAGGTCATCTACTTCGCGGCCTACATGATCACCGCCGTCGATGAGGAGGCTCGCCACCGCGACCTGCCGTCGTTGGAGGCCAAGGTGCAGACCGAGCGCTCCCGCATGGAGCAGCGTCGTGACTCCGAGCTGGAGGCCCGCCGGGTCAAGCTCGAGGAGGACATGGCTCAGCTCGAGGCCGACGGTGCCAAGGCTGACACCCGTCGCAAGGTCAAGGACGGCGCCGAGAAGGAGCTCAAGCACATCGAGACTCGGGCCCAACGCCAGATCGATCGTCTCGACGCTGTGTGGGATCGCTTCAAGAACCTCAAGGTTCAGGACCTTGAGGGTGACGAGATCCTCTACCGCGAGATGAAGTCGCGCTTCGGCAAGTACTTCGAGGGTTCGATGGGCGCCGAGGCGATCAAGCGTCGTCTCCACGACTTCGACCTCGCCGCCGAGTCCGAGAAGCTGCGCGAGATCATCAAGACCGGCCGCGGCCAGAAGAAGACCCGCGCCCTCAAGCGCCTCAAGGTCGTGCAGGCCTTCCTCGAGTCCGGCAACTCGCCGGAGGGCATGGTCCTGGACTGCGTCCCGGTCATCCCGCCGGATCTGCGCCCGATGGTGCAGCTCGACGGTGGCCGCTTCGCCACCTCGGACCTGAACGACCTCTACCGTCGCGTCATCAACCGAAACAACCGCCTCAAGAGGCTGGTTGACCTCGGCGCCCCGGAGATCATCGTCAACAACGAGAAGCGCATGCTCCAGGAGTCCGTCGACTCACTGTTCGACAACGGTCGCCGTGGGCGTCCGGTGAGTGGGCCGGGCAACCGTCCGCTCAAGTCGCTGTCTGACATGCTCAAGGGCAAGCAAGGTCGTTTCCGTCAGAACCTGCTCGGTAAGCGAGTCGATTATTCCGGCCGTTCGGTCATCGTCGTGGGCCCGCAGCTCAAGATGCACCAGTGCGGTCTGCCGAAGGCCATGGCCCTGGAACTGTTCAAGCCCTTCGTCATGAAGCGTCTGGCCGACCTTGAGCACGCCCAGAACGTCAAGTCCGCCAAGCGCATGGTCGAGCGTCAGCGTCCCGTGGTGTGGGACGTCCTCGAGGAGGTCATCAAGGAGCACCCGGTTCTGCTGAACCGTGCACCTACCCTGCACCGTCTGGGTATCCAGGCCTTCGAGCCCCAGCTCATCGAGGGCAAGGCCATCCAGCTTCATCCGCTTGTCTGCTCGGCCTTCAACGCTGACTTCGACGGTGACCAGATGGCTGTGCACCTGCCGCTGAGCCCTGAGGCCCAGGCCGAGGCCCGCGTCCTGATGCTGTCGACGAACAACATCCTCAAACCGGCTGACGGTCGCCCGGTCGCCCTGCCCTCGCACGAGATGATCATCGGCGCCTACTACCTGACGATGGCCCTTGACGGCCTCAAGGGTGAGGGACGTGCTTTCTCCTCGCTGGCCGAGGCAATCATGGCCCATGATCTCGGCGAGCTCGAGATCGGTGCCAAGATCAAGCTGCGTCTCAAGGGTGTTGTGCCGCCGCACGGCGAGACGGTTCGCGCTGACGGCTCCGTCATCCTCGACACCACCCTGGGACAGGCCCTGTTCAACGAGGTGCTGCCGGACGACTACCCGTATGTCGACTACCTCGTCGGCAAGAAGCAGATTGGCAAGATTGTCAACGACCTCAGCGAGCGGATGACCCAGCTCGAGGTGGCCCACGTCCTCGACAACCTCAAGAACATCGGCTACAAGTGGGGTTCGCTGTCCGGCGTGACCGTCTCCATCGGCGACGTCCAGACCCCGCCGACCAAGCCGGAGATTCTGGCGGGGTACGAGGCTCGCGCCGCCAAGGTCGACCGAGAGTACGACCGTGGTGCCGTGACCGAGGAGGAGCGTCGTCAGGACCTCATCCAGATCTGGACCGAGGCCACTGCTGAGCTGACCTCCGCCATGGAGGCCAACTTCACCCAGACCAACCCGGTTCACATGATGGTCGACTCGGGCGCTCGAGGCAGTATGACCCAGATGCGTCAGATCGCCGCTATGCGCGGTCTGGTGGCTGACCCGAAGGGTGACATCATTCCTCGCCCGATCAAGTCCAACTTCCGCGAGGGCCTGACGGTTCTGGAGTACTTCATCTCCACTCACGGTGGTCGTAAGGGACAGGCTGACACCGCTCTGCGTACCGCTGACTCCGGTTACCTGACTCGTCGTCTGGTCGACGTGTCCCAGGACGTCATCGTCCGCGAGGAGGACTGTGGCACCACCCGTGGCATGCCCAAGACCATTGCTGTCGACGCCGGCAACGGCAACTTGGTGCGCGCCGAGGGGCTGGACACCGCGGTGTACGCCCGATGCCTGGCTGCCGACGCCCTCGACGCCAATGGCAATGTCGTGGTGGCGGCCAACTCCGATCTCGGTGACGAGGAGATCTCCAAGCTCATCGCTGCTGGTATCTCGCAGATCAAGGTGCGTTCGGTGCTCACCTGCACTGCAGCCCAGGGCTGCTGCGCTCGTTGCTACGGACGTTCACTGTCGACCGGTCACCTGGTTGACGTCGGTGAGGCCGTCGGCATCATCGCTGCTCAGTCGATTGGTGAGCCTGGCACCCAGCTGACGATGCGTACCTTCCACACCGGTGGTGTCGCTGGTGACGACATCACCCAGGGTCTTCCCCGTGTCGTCGAGCTCTTCGAGGCCCGTAGCCCGAAGGGAAAGTCGCCGCTGGCCGAGGCCGCTGGTGTCATCCGCATCGACGAGTCCGACAACCGTCGCAAGCTCGTCCTGGTACGTGACGACGGCGAGGAGGACGTGGAGTACGTGCTGCCGCGCCGTGCCCGTCTCGAGTTCGACCTCGACGGCACTCACCGTGTCATTCGTGACGGAGTGCGGGTTGCCGCAGGTGAGCAGCTCATGGGTGGCACCGCCGACCCGCAGGACGTGCTGCGTATCTCCGGTGTTCGCCGGGTGCAGGAGTACCTCGTCAAGGAGGTTCAGAAGGTCTACAACACCCAGGGCGCTGGCATCCACGAGAAGCACATCGAGATTGTCATTCGCCAGATGCTTCGCCGCATCACCGTCATCGAGTCCGGTGACACCCAGATGATGCCTGGAGAGCTGGTGGACCGTAACTCCTACGAAAACGCCAACCGCAAGGCTGTCGCCGAGGGTGGTCGCCCGGCTGAGGGTCGTCCGGTGCTCATGGGCATCACGAAGGCCTCGCTGGCCACCGAGTCCTGGCTGTCGGCTGCCTCCTTCCAGGAGACGACGAAGGTGCTCACCGATGCCGCCATCAACGGCAAGACGGACACCTTGGTCGGCCTCAAGGAGAACGTCATCCTCGGTAAGCTCATCCCGGCCGGAACGGGCCTGGAGGTCTACCGCAACATGAGGGTGGAGCCGACCGCGGAAGCCAAGGCTGCTGCGTTCACGATGAACTACGACCCGTTCGACTACGACTTCGGTTCGGGGTCGGGCGCGGCTGTTCCGCTCGACGATCTGGATCTGGGTGATTTGAGCTGA
PROTEIN sequence
Length: 1294
VLDTNYYDRLQIGLATADQIRAWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGVEVTRSNVRRERMGHIELVAPVTHIWYFKGVPSRLGYLLDIAPKDLEKVIYFAAYMITAVDEEARHRDLPSLEAKVQTERSRMEQRRDSELEARRVKLEEDMAQLEADGAKADTRRKVKDGAEKELKHIETRAQRQIDRLDAVWDRFKNLKVQDLEGDEILYREMKSRFGKYFEGSMGAEAIKRRLHDFDLAAESEKLREIIKTGRGQKKTRALKRLKVVQAFLESGNSPEGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLVDLGAPEIIVNNEKRMLQESVDSLFDNGRRGRPVSGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKMHQCGLPKAMALELFKPFVMKRLADLEHAQNVKSAKRMVERQRPVVWDVLEEVIKEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCSAFNADFDGDQMAVHLPLSPEAQAEARVLMLSTNNILKPADGRPVALPSHEMIIGAYYLTMALDGLKGEGRAFSSLAEAIMAHDLGELEIGAKIKLRLKGVVPPHGETVRADGSVILDTTLGQALFNEVLPDDYPYVDYLVGKKQIGKIVNDLSERMTQLEVAHVLDNLKNIGYKWGSLSGVTVSIGDVQTPPTKPEILAGYEARAAKVDREYDRGAVTEEERRQDLIQIWTEATAELTSAMEANFTQTNPVHMMVDSGARGSMTQMRQIAAMRGLVADPKGDIIPRPIKSNFREGLTVLEYFISTHGGRKGQADTALRTADSGYLTRRLVDVSQDVIVREEDCGTTRGMPKTIAVDAGNGNLVRAEGLDTAVYARCLAADALDANGNVVVAANSDLGDEEISKLIAAGISQIKVRSVLTCTAAQGCCARCYGRSLSTGHLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEARSPKGKSPLAEAAGVIRIDESDNRRKLVLVRDDGEEDVEYVLPRRARLEFDLDGTHRVIRDGVRVAAGEQLMGGTADPQDVLRISGVRRVQEYLVKEVQKVYNTQGAGIHEKHIEIVIRQMLRRITVIESGDTQMMPGELVDRNSYENANRKAVAEGGRPAEGRPVLMGITKASLATESWLSAASFQETTKVLTDAAINGKTDTLVGLKENVILGKLIPAGTGLEVYRNMRVEPTAEAKAAAFTMNYDPFDYDFGSGSGAAVPLDDLDLGDLS*