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NECEvent2014_5_6_scaffold_2954_1

Organism: NECEvent2014_5_6_Propionibacterium_HGH0353-rel_64_7

near complete RP 51 / 55 MC: 5 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: 2..334

Top 3 Functional Annotations

Value Algorithm Source
Zn-dependent hydrolase, RNA-metabolizing, CPSF (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 110.0
  • Bit_score: 148
  • Evalue 1.20e-33
Ribonuclease J n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X8C3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 110.0
  • Bit_score: 215
  • Evalue 2.10e-53
Ribonuclease J {ECO:0000313|EMBL:EPH06386.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 110.0
  • Bit_score: 215
  • Evalue 3.00e-53

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 333
GAGGGAACCGGGGTGAGCGAACTCACCCCCGATGCCCTGGCCGATCGCAAGATTCTCGGTGAGGAGGGGTTCATCTCGGTGTCGGCCGCCATCAACCCCAAGAGCGCGAGCATCGTGTCGGGGCCAGACATCAAGGCTAAGGGATTCGCCGAGGACGATCGTGGCTACGACGAGATCCGCGACCGACTCGTGAGCGAGTTGCAGTCGGCGATGCGCGGCGGCATGAGCGACCAGCACAAACTCCAGCAGGTTGCCCGACGCACCATCGGGCGCTGGGTGGCGCAGACCTACCGACGTCGCCCCATGATCGTGCCGACCATCATCGTCGTGTGA
PROTEIN sequence
Length: 111
EGTGVSELTPDALADRKILGEEGFISVSAAINPKSASIVSGPDIKAKGFAEDDRGYDEIRDRLVSELQSAMRGGMSDQHKLQQVARRTIGRWVAQTYRRRPMIVPTIIVV*