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NECEvent2014_5_6_scaffold_502

Alias: 175_005_scaffold_502

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_6_scaffold_502_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2..487)
DNA (486bp) protein (162aa)
UPI0003D68086 related cluster n=1 Tax=unknown RepID=UPI0003D68086 rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativi
protein-export membrane protein SecF
NECEvent2014_5_6_scaffold_502_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(484..1710)
DNA (1227bp) protein (409aa)
UPI0003D5BFE9 related cluster n=1 Tax=unknown RepID=UPI0003D5BFE9 rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridi
protein-export membrane protein SecD
NECEvent2014_5_6_scaffold_502_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1734..2306)
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillon
UPI0003D679EF related cluster n=1 Tax=unknown RepID=UPI0003D679EF rbh
5-formyltetrahydrofolate cyclo-ligase
NECEvent2014_5_6_scaffold_502_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2299..2634)
DNA (336bp) protein (112aa)
UPI0003D5C976 related cluster n=1 Tax=unknown RepID=UPI0003D5C976
Preprotein translocase {ECO:0000313|EMBL:ETI87288.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivo
preprotein translocase
NECEvent2014_5_6_scaffold_502_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2717..3829)
DNA (1113bp) protein (371aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
UPI0003D5E75B related cluster n=1 Tax=unknown RepID=UPI0003D5E75B rbh
queuine tRNA-ribosyltransferase
NECEvent2014_5_6_scaffold_502_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3837..4853)
DNA (1017bp) protein (339aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
UPI0003D5D2C1 related cluster n=1 Tax=unknown RepID=UPI0003D5D2C1 rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
NECEvent2014_5_6_scaffold_502_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4868..6220)
DNA (1353bp) protein (451aa)
UPI0003D64778 related cluster n=1 Tax=unknown RepID=UPI0003D64778 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF07721.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
SpoIID/LytB domain protein
NECEvent2014_5_6_scaffold_502_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6224..6430)
DNA (207bp) protein (69aa)
UPI0003D5AAC3 related cluster n=1 Tax=unknown RepID=UPI0003D5AAC3
Uncharacterized protein {ECO:0000313|EMBL:ETI87411.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
hypothetical protein
NECEvent2014_5_6_scaffold_502_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6423..7460)
DNA (1038bp) protein (346aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenom
UPI0003D65022 related cluster n=1 Tax=unknown RepID=UPI0003D65022 rbh
Holliday junction DNA helicase RuvB
NECEvent2014_5_6_scaffold_502_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7463..8071)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
ruvA; putative Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
UPI0003D5BEC4 related cluster n=1 Tax=unknown RepID=UPI0003D5BEC4 rbh
NECEvent2014_5_6_scaffold_502_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8068..8565)
DNA (498bp) protein (166aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
UPI0003D5A6FD related cluster n=1 Tax=unknown RepID=UPI0003D5A6FD rbh
crossover junction endodeoxyribonuclease ruvC
NECEvent2014_5_6_scaffold_502_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8713..9750)
DNA (1038bp) protein (346aa)
UPI0003D656A1 related cluster n=1 Tax=unknown RepID=UPI0003D656A1 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI87407.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
3D domain-containing protein
NECEvent2014_5_6_scaffold_502_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10116..11015)
DNA (900bp) protein (300aa)
UPI0003D6706A related cluster n=1 Tax=unknown RepID=UPI0003D6706A
Uncharacterized protein {ECO:0000313|EMBL:KGF07725.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
TonB-dependent receptor plug
Displaying 13 items

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