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NECEvent2014_5_6_Enterobacteriales_51_60_partial

NECEvent2014_5_6_Enterobacteriales_53_45
In projects: NECEvent2014_5_6

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_5_6_UNK

Properties

Avg. coverage: 45.32 Longest contig: 363.18 Kbp Bin length: 4.47 Mbp GC content: 52.96 %
Contigs count: 118 Features count: 4357 rRNAs count: 0 tRNAs count: 51

Genome completeness

partial RP 15 / 55 MC: 1 BSCG 13 / 51 ASCG 7 / 38 MC: 1
Displaying items 1-50 of 118 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_6_scaffold_0 175_005_scaffold_0
Order: Enterobacteriales (96.04%)
328 363177 bp 53.63 34.02 89.51
NECEvent2014_5_6_scaffold_2 175_005_scaffold_2
Order: Enterobacteriales (92.83%)
293 317046 bp 53.14 33.64 87.07
NECEvent2014_5_6_scaffold_1 175_005_scaffold_1
Order: Enterobacteriales (93.14%)
277 257138 bp 52.18 40.12 88.09
NECEvent2014_5_6_scaffold_3 175_005_scaffold_3
Order: Enterobacteriales (94.38%)
178 184206 bp 52.74 38.89 90.70
NECEvent2014_5_6_scaffold_16 175_005_scaffold_16
Order: Enterobacteriales (95.76%)
165 187498 bp 53.80 43.39 90.18
NECEvent2014_5_6_scaffold_32 175_005_scaffold_32
Order: Enterobacteriales (94.19%)
155 160315 bp 54.71 45.57 90.09
NECEvent2014_5_6_scaffold_6 175_005_scaffold_6
Order: Enterobacteriales (94.04%)
151 156372 bp 53.77 57.58 88.58
NECEvent2014_5_6_scaffold_7 175_005_scaffold_7
Order: Enterobacteriales (90.54%)
148 169317 bp 53.97 52.64 88.62
NECEvent2014_5_6_scaffold_24 175_005_scaffold_24
Order: Enterobacteriales (96.55%)
145 158314 bp 53.62 48.18 88.86
NECEvent2014_5_6_scaffold_11 175_005_scaffold_11
Order: Enterobacteriales (99.19%)
123 142328 bp 53.15 54.09 91.16
NECEvent2014_5_6_scaffold_10 175_005_scaffold_10
Order: Enterobacteriales (97.5%)
120 120301 bp 53.97 57.10 90.41
NECEvent2014_5_6_scaffold_12 175_005_scaffold_12
Order: Enterobacteriales (96.43%)
112 109055 bp 52.89 37.05 85.89
NECEvent2014_5_6_scaffold_21 175_005_scaffold_21
Order: Enterobacteriales (97.32%)
112 128090 bp 52.34 54.08 88.59
NECEvent2014_5_6_scaffold_26 175_005_scaffold_26
Order: Enterobacteriales (96.26%)
107 110555 bp 51.81 48.32 86.15
NECEvent2014_5_6_scaffold_33 175_005_scaffold_33
Order: Enterobacteriales (92.86%)
98 109331 bp 53.35 46.89 89.44
NECEvent2014_5_6_scaffold_31 175_005_scaffold_31
Order: Enterobacteriales (84.27%)
89 84481 bp 52.17 36.00 86.45
NECEvent2014_5_6_scaffold_19 175_005_scaffold_19
Order: Enterobacteriales (93.98%)
83 96551 bp 52.68 43.28 88.87
NECEvent2014_5_6_scaffold_34 175_005_scaffold_34
Order: Enterobacteriales (91.36%)
81 78900 bp 52.41 41.36 85.73
NECEvent2014_5_6_scaffold_38 175_005_scaffold_38
Order: Enterobacteriales (84.81%)
79 75792 bp 52.45 55.14 89.04
NECEvent2014_5_6_scaffold_42 175_005_scaffold_42
Order: Enterobacteriales (95.83%)
72 71445 bp 53.22 36.35 88.46
NECEvent2014_5_6_scaffold_43 175_005_scaffold_43
Order: Enterobacteriales (94.12%)
68 70999 bp 54.45 60.43 91.64
NECEvent2014_5_6_scaffold_56 175_005_scaffold_56
Order: Enterobacteriales (98.41%)
63 57578 bp 52.37 43.07 89.06
NECEvent2014_5_6_scaffold_74 175_005_scaffold_74
Order: Enterobacteriales (96.49%)
57 47560 bp 50.48 44.61 90.15
NECEvent2014_5_6_scaffold_161 175_005_scaffold_161
Order: Enterobacteriales (98.15%)
54 49807 bp 52.14 40.74 86.70
NECEvent2014_5_6_scaffold_133 175_005_scaffold_133
Order: Enterobacteriales (91.67%)
48 50501 bp 53.66 47.58 90.15
NECEvent2014_5_6_scaffold_69 175_005_scaffold_69
Order: Enterobacteriales (100%)
46 50681 bp 55.54 51.06 89.59
NECEvent2014_5_6_scaffold_91 175_005_scaffold_91
Order: Enterobacteriales (86.67%)
45 39820 bp 52.69 46.33 85.63
NECEvent2014_5_6_scaffold_89 175_005_scaffold_89
Order: Enterobacteriales (100%)
42 40754 bp 54.20 56.92 91.97
NECEvent2014_5_6_scaffold_102 175_005_scaffold_102
Order: Enterobacteriales (100%)
38 36482 bp 52.70 44.43 90.69
NECEvent2014_5_6_scaffold_145 175_005_scaffold_145
Order: Enterobacteriales (94.44%)
36 35434 bp 52.39 52.59 85.64
NECEvent2014_5_6_scaffold_76 175_005_scaffold_76
Order: Enterobacteriales (90.91%)
33 46299 bp 54.10 39.93 87.35
NECEvent2014_5_6_scaffold_123 175_005_scaffold_123
Order: Enterobacteriales (96.88%)
32 32340 bp 55.11 55.38 91.92
NECEvent2014_5_6_scaffold_313 175_005_scaffold_313
Order: Enterobacteriales (93.33%)
30 28915 bp 52.10 40.56 85.75
NECEvent2014_5_6_scaffold_111 175_005_scaffold_111
Order: Enterobacteriales (96.43%)
28 34696 bp 54.59 31.78 92.06
NECEvent2014_5_6_scaffold_139 175_005_scaffold_139
Genus: Enterobacter (50%)
28 29760 bp 55.76 56.83 90.87
NECEvent2014_5_6_scaffold_160 175_005_scaffold_160
Order: Enterobacteriales (85.71%)
28 26442 bp 49.94 36.28 80.84
NECEvent2014_5_6_scaffold_169 175_005_scaffold_169
Order: Enterobacteriales (100%)
27 25847 bp 52.38 59.02 93.27
NECEvent2014_5_6_scaffold_143 175_005_scaffold_143
Order: Enterobacteriales (96.15%)
26 29231 bp 53.89 43.91 86.73
NECEvent2014_5_6_scaffold_184 175_005_scaffold_184
Order: Enterobacteriales (100%)
25 24220 bp 53.24 36.97 92.48
NECEvent2014_5_6_scaffold_211 175_005_scaffold_211
Order: Enterobacteriales (95.65%)
23 22353 bp 55.16 39.82 90.34
NECEvent2014_5_6_scaffold_263 175_005_scaffold_263
Order: Enterobacteriales (95.65%)
23 22631 bp 54.08 37.14 89.93
NECEvent2014_5_6_scaffold_214 175_005_scaffold_214
Order: Enterobacteriales (90.91%)
22 22219 bp 52.64 65.06 89.95
NECEvent2014_5_6_scaffold_236 175_005_scaffold_236
Order: Enterobacteriales (95.24%)
21 20797 bp 45.87 57.16 85.83
NECEvent2014_5_6_scaffold_242 175_005_scaffold_242
Order: Enterobacteriales (90.48%)
21 20495 bp 53.03 72.95 91.31
NECEvent2014_5_6_scaffold_249 175_005_scaffold_249
Order: Enterobacteriales (100%)
20 19923 bp 54.29 48.32 89.04
NECEvent2014_5_6_scaffold_271 175_005_scaffold_271
Order: Enterobacteriales (100%)
20 18343 bp 53.31 55.61 90.12
NECEvent2014_5_6_scaffold_404 175_005_scaffold_404
Species: Klebsiella variicola (90%)
20 13233 bp 50.27 34.98 81.05
NECEvent2014_5_6_scaffold_308 175_005_scaffold_308
Species: Klebsiella pneumoniae (88.24%)
17 16711 bp 52.70 32.22 86.15
NECEvent2014_5_6_scaffold_340 175_005_scaffold_340
Order: Enterobacteriales (76.47%)
17 15219 bp 48.49 49.67 86.00
NECEvent2014_5_6_scaffold_509 175_005_scaffold_509
Order: Enterobacteriales (100%)
16 10963 bp 50.68 66.18 92.60
Displaying items 1-50 of 118 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.