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NECEvent2014_5_6_scaffold_2725_1

Organism: NECEvent2014_5_6_Enterobacter_cloacae_rel_MGH25_55_430_partial

partial RP 23 / 55 MC: 3 BSCG 23 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 2..1336

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 445.0
  • Bit_score: 862
  • Evalue 1.90e-247
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 445.0
  • Bit_score: 861
  • Evalue 8.40e-248
DNA-directed RNA polymerase subunit beta' n=1 Tax=Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032) RepID=C9XTD0_CROTZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 445.0
  • Bit_score: 861
  • Evalue 3.00e-247

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Taxonomy

Citrobacter sp. MGH 55 → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
AACCTGCTCGGTAAGCGTGTTGACTACTCCGGTCGTTCTGTAATCACCGTAGGTCCATACCTGCGTCTGCATCAGTGCGGTCTGCCGAAGAAAATGGCGCTGGAGCTGTTCAAACCGTTCATTTACGGCAAGCTGGAACTGCGTGGCCTCGCCACCACCATCAAAGCCGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTAGTCTGGGATATCCTGGACGAAGTGATCCGCGAACACCCGGTACTGTTGAACCGTGCGCCAACTCTGCACCGTCTGGGTATCCAGGCCTTTGAACCGGTACTGATCGAAGGTAAAGCTATCCAACTGCACCCGCTGGTTTGTGCGGCATACAACGCCGACTTCGATGGTGACCAGATGGCTGTTCACGTACCGCTGACGCTGGAAGCCCAGCTTGAAGCGCGTGCGCTGATGATGTCTACCAACAACATCCTGTCTCCGGCGAACGGCGAACCAATCATCGTTCCGTCTCAGGACGTTGTACTGGGTCTGTACTACATGACCCGTGACTGTGTTAACGCCAAAGGCGAAGGCATGGTGCTGACTGGCCCGAAAGAAGCAGAGCGTATTTATCGCGCTGGCCTGGCCTCTCTGCATGCGCGCGTTAAAGTGCGTATCACTGAGTATGAAAAAGATGCACAGGGCGAATTTACGTCTAAAACCAGCCTGATCGATACGACCGTTGGTCGTGCGATCCTGTGGATGATCGTTCCGAAAGGTCTGCCGTTCTCTATCGTGAACCAGCCTCTGGGTAAAAAAGCGATCTCCAAAATGCTGAACACCTGTTACCGCATTTTGGGTCTGAAACCGACCGTTATCTTTGCTGACCAGACGATGTACACCGGCTTTGCTTATGCAGCGCGTTCAGGTGCATCTGTTGGTATCGATGACATGGTTATCCCGGAGAAGAAACACGAGATCATCTCCGAGGCGGAAGCCGAAGTGGCTGAGATCCAGGAGCAGTTCCAGTCTGGTCTGGTTACCGCAGGCGAACGCTATAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAGGCGATGATGGACAACCTGCAGACCGAAACGGTTATCAACCGTGAAGGTAAAGAAGAGCAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACGCACGGTGCGCGTAAAGGTCTGGCGGAT
PROTEIN sequence
Length: 445
NLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAGLASLHARVKVRITEYEKDAQGEFTSKTSLIDTTVGRAILWMIVPKGLPFSIVNQPLGKKAISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINREGKEEQQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLAD