ggKbase home page

NECEvent2014_5_6_scaffold_477_15

Organism: NECEvent2014_5_6_Enterobacter_cloacae-rel_56_34_partial

partial RP 10 / 55 MC: 3 BSCG 10 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(11114..11440)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=3 Tax=Escherichia coli RepID=N2X870_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 213
  • Evalue 8.00e-53
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 213
  • Evalue 2.20e-53
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 213
  • Evalue 1.10e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Klebsiella pneumoniae → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
TCCATGGAAACACCAATTGGTGATGATGAAGATTCGCATCTGGGTGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGACTCTGCCACCACCGAAAGCCTGCGTGCCGCAACGCACGATGTTCTGGCTGGCCTGACCGCCCGTGAAGCGAAAGTGCTGCGTATGCGTTTCGGTATCGATATGAACACCGACCACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGTAAGCTGCGTCACCCAAGCCGCTCTGAAGTGCTGCGTAGCTTCCTGGACGACTAA
PROTEIN sequence
Length: 109
SMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD*