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NECEvent2014_5_7_UNK

In projects: NECEvent2014_5_7
Displaying items 101-150 of 332 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_7_scaffold_6310 175_006_scaffold_6310
Species: Eggerthella lenta (100%)
2 1024 bp 60.45 3.22 75.88
NECEvent2014_5_7_scaffold_5415 175_006_scaffold_5415
Species: Eggerthella lenta (50%)
2 1208 bp 68.05 3.23 82.95
NECEvent2014_5_7_scaffold_4691 175_006_scaffold_4691
Species: Staphylococcus epidermidis (100%)
2 1394 bp 27.83 3.23 99.86
NECEvent2014_5_7_scaffold_5015 175_006_scaffold_5015
Species: Eggerthella lenta (50%)
2 1302 bp 60.52 3.23 44.70
NECEvent2014_5_7_scaffold_6367 175_006_scaffold_6367
Species: Finegoldia magna (50%)
2 1013 bp 36.23 3.26 87.66
NECEvent2014_5_7_scaffold_6373 175_006_scaffold_6373
Species: Peptoclostridium difficile (100%)
1 1012 bp 63.04 3.26 99.90
NECEvent2014_5_7_scaffold_5903 175_006_scaffold_5903
Genus: Staphylococcus (66.67%)
3 1101 bp 27.52 3.27 65.67
NECEvent2014_5_7_scaffold_3953 175_006_scaffold_3953
Species: Facklamia hominis (66.67%)
3 1652 bp 35.47 3.27 109.69
NECEvent2014_5_7_scaffold_6409 175_006_scaffold_6409
Species: human gut metagenome (100%)
1 1007 bp 35.15 3.28 99.80
NECEvent2014_5_7_scaffold_6415 175_006_scaffold_6415
Species: Eggerthella lenta (100%)
1 1006 bp 65.01 3.28 99.90
NECEvent2014_5_7_scaffold_5931 175_006_scaffold_5931
Species: Staphylococcus epidermidis (66.67%)
3 1095 bp 26.30 3.29 82.47
NECEvent2014_5_7_scaffold_5934 175_006_scaffold_5934
Species: Staphylococcus epidermidis (50%)
2 1095 bp 32.60 3.29 69.32
NECEvent2014_5_7_scaffold_5945 175_006_scaffold_5945
Species: Anaerococcus hydrogenalis (100%)
1 1092 bp 32.88 3.30 99.73
NECEvent2014_5_7_scaffold_6458 175_006_scaffold_6458
Species: Staphylococcus epidermidis (100%)
2 1000 bp 30.30 3.30 62.40
NECEvent2014_5_7_scaffold_4528 175_006_scaffold_4528
Species: Gardnerella vaginalis (100%)
2 1448 bp 30.46 3.31 58.01
NECEvent2014_5_7_scaffold_5998 175_006_scaffold_5998
Species: Peptoclostridium difficile (100%)
3 1083 bp 66.02 3.32 83.66
NECEvent2014_5_7_scaffold_4429 175_006_scaffold_4429
Species: Paenibacillus sp. P22 (50%)
2 1481 bp 23.50 3.34 65.23
NECEvent2014_5_7_scaffold_6017 175_006_scaffold_6017
Species: Eggerthella lenta (100%)
2 1079 bp 62.56 3.34 84.24
NECEvent2014_5_7_scaffold_5595 175_006_scaffold_5595
Species: Eggerthella sp. HGA1 (50%)
2 1165 bp 60.34 3.35 43.26
NECEvent2014_5_7_scaffold_3858 175_006_scaffold_3858
Phylum: Firmicutes (50%)
4 1698 bp 46.58 3.36 82.51
NECEvent2014_5_7_scaffold_5613 175_006_scaffold_5613
Species: Staphylococcus sp. DORA_6_22 (100%)
1 1160 bp 29.31 3.36 70.09
NECEvent2014_5_7_scaffold_3688 175_006_scaffold_3688
Species: Eggerthella sp. YY7918 (100%)
1 1779 bp 68.07 3.37 100.00
NECEvent2014_5_7_scaffold_6123 175_006_scaffold_6123
Species: Staphylococcus sp. M0480 (50%)
2 1062 bp 31.64 3.39 87.57
NECEvent2014_5_7_scaffold_5679 175_006_scaffold_5679
Species: Staphylococcus epidermidis (100%)
2 1148 bp 34.67 3.40 83.36
NECEvent2014_5_7_scaffold_4105 175_006_scaffold_4105
Species: Serratia fonticola (50%)
2 1589 bp 33.86 3.40 101.20
NECEvent2014_5_7_scaffold_6157 175_006_scaffold_6157
Species: human gut metagenome (100%)
1 1054 bp 35.39 3.42 99.62
NECEvent2014_5_7_scaffold_5359 175_006_scaffold_5359
Species: Staphylococcus epidermidis (100%)
2 1220 bp 30.41 3.44 75.00
NECEvent2014_5_7_scaffold_5793 175_006_scaffold_5793
Species: Kosakonia radicincitans (100%)
1 1122 bp 46.88 3.48 55.08
NECEvent2014_5_7_scaffold_5058 175_006_scaffold_5058
Order: Clostridiales (100%)
3 1290 bp 34.57 3.49 37.21
NECEvent2014_5_7_scaffold_6335 175_006_scaffold_6335
Species: Peptoniphilus sp. BV3AC2 (50%)
2 1019 bp 28.46 3.53 90.68
NECEvent2014_5_7_scaffold_5486 175_006_scaffold_5486
Species: Staphylococcus epidermidis (100%)
2 1191 bp 30.23 3.53 66.75
NECEvent2014_5_7_scaffold_4551 175_006_scaffold_4551
Phylum: Firmicutes (66.67%)
3 1439 bp 31.55 3.54 80.06
NECEvent2014_5_7_scaffold_3566 175_006_scaffold_3566
Species: Eggerthella sp. HGA1 (66.67%)
3 1845 bp 66.07 3.58 91.54
NECEvent2014_5_7_scaffold_5975 175_006_scaffold_5975
Species: Anaerococcus prevotii (100%)
2 1086 bp 27.44 3.59 90.88
NECEvent2014_5_7_scaffold_3912 175_006_scaffold_3912
Species: Eggerthella sp. HGA1 (100%)
3 1671 bp 61.58 3.59 89.05
NECEvent2014_5_7_scaffold_4237 175_006_scaffold_4237
Species: Staphylococcus epidermidis (66.67%)
3 1542 bp 34.57 3.60 99.03
NECEvent2014_5_7_scaffold_3759 175_006_scaffold_3759
Species: [Clostridium] sordellii (100%)
3 1746 bp 27.66 3.61 87.11
NECEvent2014_5_7_scaffold_5257 175_006_scaffold_5257
Phylum: Firmicutes (66.67%)
3 1243 bp 32.50 3.62 62.27
NECEvent2014_5_7_scaffold_4659 175_006_scaffold_4659
Species: Eggerthella sp. HGA1 (100%)
2 1404 bp 59.47 3.63 97.86
NECEvent2014_5_7_scaffold_5649 175_006_scaffold_5649
Species: Eggerthella sp. HGA1 (50%)
2 1154 bp 61.18 3.64 80.33
NECEvent2014_5_7_scaffold_4966 175_006_scaffold_4966
Species: Staphylococcus sp. DORA_6_22 (50%)
2 1316 bp 27.43 3.65 79.79
NECEvent2014_5_7_scaffold_3999 175_006_scaffold_3999
Species: Sporomusa ovata (50%)
2 1633 bp 52.11 3.67 99.39
NECEvent2014_5_7_scaffold_4213 175_006_scaffold_4213
Species: Gallibacterium anatis (50%)
2 1548 bp 62.92 3.68 98.64
NECEvent2014_5_7_scaffold_5408 175_006_scaffold_5408
Species: Clostridium botulinum (50%)
2 1209 bp 27.63 3.72 88.34
NECEvent2014_5_7_scaffold_4066 175_006_scaffold_4066
Species: Eggerthella sp. HGA1 (75%)
4 1607 bp 60.86 3.73 91.85
NECEvent2014_5_7_scaffold_5249 175_006_scaffold_5249
Species: Staphylococcus epidermidis (100%)
1 1245 bp 37.11 3.73 99.76
NECEvent2014_5_7_scaffold_6220 175_006_scaffold_6220
Species: human gut metagenome (100%)
1 1039 bp 31.28 3.75 55.15
NECEvent2014_5_7_scaffold_6222 175_006_scaffold_6222
Species: Eggerthella lenta (50%)
2 1039 bp 64.20 3.75 84.89
NECEvent2014_5_7_scaffold_6234 175_006_scaffold_6234
Species: [Clostridium] sordellii (100%)
1 1036 bp 35.91 3.76 99.90
NECEvent2014_5_7_scaffold_3607 175_006_scaffold_3607
Species: Staphylococcus epidermidis (66.67%)
3 1824 bp 29.39 3.78 88.65
Displaying items 101-150 of 332 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.