ggKbase home page

NECEvent2014_5_7_scaffold_26_10

Organism: NECEvent2014_5_7_Clostridium_perfringens_28_149

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 5146..5580

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L16 n=11 Tax=Clostridium perfringens RepID=RL16_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 144.0
  • Bit_score: 294
  • Evalue 4.70e-77
rplP; 50S ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 144.0
  • Bit_score: 294
  • Evalue 1.30e-77
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 144.0
  • Bit_score: 294
  • Evalue 6.60e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 435
ATGTTAATGCCTAAAAGAGTTAAACATCGTAAGGTACAACGTGGTAGAATGAAAGGTAAGGCAACTAGAGGAAACTTTCTAGCTTACGGAGATTTCGGAATCCAAGCTACAACTTGTGGATGGATCACTAGTAACCAAATAGAAGCTGCGAGAATAGCTATCAATAGATATATAAGAAGAGGCGGAAAGCTTTGGATAAAAATATTCCCAGACAAACCTGTAACTGAGAAACCAGCTGAAACAAGAATGGGTTCAGGTAAAGGTTCAGTTGAATACTGGGTAGCAGTAGTTAAACCAGGTAGAGTTTTATTCGAGTTATCTGGAGTTGATGAAGAGAAAGCAAGAGAAGCTATGAGACTTGCTTCACACAAACTTCCTGTAAAGACTAAGTTCGTTACAAGAAGAGATTTTGAGGAAATGGGTGGTGAAGAATAA
PROTEIN sequence
Length: 145
MLMPKRVKHRKVQRGRMKGKATRGNFLAYGDFGIQATTCGWITSNQIEAARIAINRYIRRGGKLWIKIFPDKPVTEKPAETRMGSGKGSVEYWVAVVKPGRVLFELSGVDEEKAREAMRLASHKLPVKTKFVTRRDFEEMGGEE*