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NECEvent2014_5_7_scaffold_49_10

Organism: NECEvent2014_5_7_Clostridium_perfringens_28_149

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 14023..14625

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R585_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 390
  • Evalue 8.80e-106
  • rbh
RNA polymerase sigma-70 factor, ECF family {ECO:0000313|EMBL:EDT24581.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 390
  • Evalue 1.20e-105
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 194.0
  • Bit_score: 377
  • Evalue 2.80e-102

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 603
ATGAATTTTACTGAAGATGGTGGGGTGAGACGGATTAATGAAAAGAAATTAATAACCCTTGTAAAAAAGAATAATGATAAAAAAGCAGCTGGTGAAATTGTTAAGTTTTATTATAAGGAGATATTTGCTTATGTTTTTAGACAAACCTCTAATGAGGAGTTATCTAAGGATTTAACTCAAGAAATATTTATTTCTATGCTTAAATCCTTAGGAGGATTTGATGATGAAAAAGCTTCCTTTAGGACATGGCTTTATAAAATAGCCAGTAACAAGATAATCGATAATTACAGATCTACATATTATAAATATGTTACTGTTGTAGATGAATTTGAGGAAGGATTAGTAGGCTATGAAAATGATTTGGAAGAATCATTTCAGATTAAGGAGGATGCTAAGGAGATACTAGAGATTATTAATACTTTAAATACAAGTATTCAGCAAATTTTAAGACTAAAGATATTTGGAGGAATGACATTTTTAGAGATTGCTTCTCTAATTGATATGTCAGAGTCTACAGTTAAAACTAAATATTATTCAAGTATTAAAAAGATAAAGAAGATATTGGAGGTGAAGAAGAATGAACAGAGAAAAAGAGGAGTTTAA
PROTEIN sequence
Length: 201
MNFTEDGGVRRINEKKLITLVKKNNDKKAAGEIVKFYYKEIFAYVFRQTSNEELSKDLTQEIFISMLKSLGGFDDEKASFRTWLYKIASNKIIDNYRSTYYKYVTVVDEFEEGLVGYENDLEESFQIKEDAKEILEIINTLNTSIQQILRLKIFGGMTFLEIASLIDMSESTVKTKYYSSIKKIKKILEVKKNEQRKRGV*