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NECEvent2014_5_7_scaffold_80_17

Organism: NECEvent2014_5_7_Clostridium_perfringens_28_149

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(30115..30579)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=10 Tax=Clostridium perfringens RepID=H7CVU5_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 154.0
  • Bit_score: 300
  • Evalue 1.20e-78
greA; transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 154.0
  • Bit_score: 300
  • Evalue 3.40e-79
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 154.0
  • Bit_score: 300
  • Evalue 1.70e-78

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 465
ATGAATAATTATTTGACAGAGGAAAACGTTAGAAAGTTAAGAGAAGAATTAGACTATAGAATGTCTGTTGTTAGAGCAAAGATTGCGAAAGAGAAACTTGAGGCAGCAGCCCATGGTGATAGATCAGAAAACGCTGAGTATAAGGAAGCTTGTAGAAACTATAGAGAAAATGATAATAGAATACAATACCTTTTAACTATGATTTCAACAGCAATAATAGTTGATGAAGAAAGTAATGATAAATCTACACTAGGTCTTAACAGCAAAGCTAGAATTAAATTTGTTGAAGATGATGATGAGGATGTTGTTACTTTAGTTACAACTATGGATTTAGATTTGGAAAACATGTGTATAAGCATAGAATCAGATTTAGGAAAGGCCCTAATTGGTAAAAAGGTTGGAGATGTAGTAGAAGTTGAAGCTCCTGGTGGAAACTATACTGTAGAAGTATTAGAAATATTATAA
PROTEIN sequence
Length: 155
MNNYLTEENVRKLREELDYRMSVVRAKIAKEKLEAAAHGDRSENAEYKEACRNYRENDNRIQYLLTMISTAIIVDEESNDKSTLGLNSKARIKFVEDDDEDVVTLVTTMDLDLENMCISIESDLGKALIGKKVGDVVEVEAPGGNYTVEVLEIL*