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NECEvent2014_5_7_scaffold_338_12

Organism: NECEvent2014_5_7_Veillonella_Taxon-158_rel_39_109

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 9839..14140

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2766
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBM3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2766
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 999.99
  • Bit_score: 2710
  • Evalue 0.0

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Taxonomy

Veillonella sp. oral taxon 158 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 4302
ATGGGAAGCAAGGTTATTTTAAAAAATGAAATGGACCTTGCTTTATTTGACGTTGCCCGAGCAGGAAAACTGAGACCTGAAAGATGTCTTTTCCATGCCGTTATAGAAAATGGTAGACCAGTGTGTTTGATAGGGGTGAAAGCAAATATGTTCAAACCTGAACAGGTAGGCAAACGAACTCGTTATACATATGCAAAAATTAACGAAGTTATTAAAATGCCGCATTTATTGGACATTCAACGTAAATCGTATGAATGGTTCTTGGAGAGTGGTTTACAAAATATTTTCAACGATATTTCTCCGATTAAAGACAATTCAGGTAATTTAGTACTTTCTTTTGAAGGTTTCAGCTTAGGTGAGCCTAAGTATGATATTAATGAATGTAAAAACCGTGATGCTACATATGCAGCACCACTTCGTGTAAATATTCGCTTGGTAAATAATGATCCAGAAAACATGGACATTAAAGAACAAGAAGTATTCATGGGCGACTTCCCATTGATGACTGATACAGGCACTTTCATCATCAATGGTGCAGAACGTGTTATCGTATCCCAATTGGTACGTTCTCCAGGCGTTTACTATAATAAAGAAATCGATACAATGGGTAACCGTTTATACGATTCCACAGTGATTCCTAATCGTGGCGCATGGATCGAGCTTGAAACAGATGCGAGCGAAATCGTAGCAGTTCGTATTGACCGTAACCGTAAGTTACCAGCTACAGTATTGGTACGTGCCTTAGGTTGGGATACTAATGAAAGCATCCTTGACCTCTTCTGGAACGGTAAAACTGATGAAGATGGTTTGCCAATTTATGATGAGCGCATCGTTCGCACATTAGAAAAAGATACAACTCAATCCGCTGATGAAGCATTAGTTGAAATCTATAAAAAATTGCGTCCAGGCGAGCCTCCAACAGTAGAGTCTGCTCGTAACTTGTTCGATAACTTGTTCTTCGATGCACGCCGTTATGACTTGGCGCGCGTTGGTCGTTATAAATTGAACAAAAAACTTGGCTGGCGTCAACGTATGTTGGGTCACACATTGGCTCAACCTATCGTAGATCCTGAAACTGGCGAAGTAATCCTTGATGCGGGTGTACAAGTTGGGGAAGAACAACTTGATATCGTAGCAAATAGCCATGTATTCGATGGTGAAGGCTTTGCTGAATTCTACATCGTAAATAACGATGGTGTAGAGTCCAAAGTGATTTGTAACAACTGCAACTTGCCATTCGATCACCGCACAGTAACACGAGAAGACATGATCGCTAACATCTCTTACTTGCTCAACCTTATGGATGGTGCAGGTCACACAGATGATATTGACCACTTGGGTAACCGTCGTCTTCGTTGCGTAGGTGAATTGTTGCAAAACCAATTCCGTATTGGTTTGACTCGTATGGAACGTGTTGTTCGTGAACGTATGACAATTCAAGAAATCGAATCTATTACGCCTCAAGCGTTGATTAACATTCGTCCTGTAGTGGCTGCAATCAAAGAGTTCTTTGGTTCCTCCCAGTTGTCCCAGTTCATGGATCAAACAAACCCATTAGCAGAATTGACTCACAAACGTCGTTTATCTGCCCTTGGTCCTGGCGGTTTATCTCGTGAGCGTGCAGGCTTCGAAGTTCGTGACGTGCATCATTCTCACTATGGCCGTATGTGTCCAATCGAGACTCCAGAGGGTCCAAACATCGGTTTGATCAACTCCTTGTCTAACTACGCGAAAGTAAACGAGTTCGGTTTCATCGAAGCTCCTTACCGTAAAGTAGAAAAAGTATATGGCAAAGGTGCTGATGCTGATAAAGTAGTTAAAGTACGCGTATCTGACAGCGTAGTATACATGACAGCAGATGAAGAAGAAGGCATGACAATTGCCCAAGCGAACTCTCCACTTGATGAGGAAGGTTACTTCACAACTGAACATGTAGCTTGTCGTCGTGGTCATGACGTATTAGAAGTTACACCTGATAAGGTTGACTATATGGACGTAAGTCCAAAAGAAGTTGTATCCATCGGTACAGCTATGATTCCATTCCTTGAAAATGACGATGCTAACCGTGCCTTGATGGGTGCGAACATGCAACGTCAGGCGGTACCACTCTTGCGTGCACAAGCTCCACTTGTTGGTACAGGCATGGAATATACAGCAGCGACTGACTCCGGCGTTTGCGTACTTGCACGTGAAGCTGGTAAAGTTGTACGTTGCTGGGGTAATGAAATCCACGTACTTCGCGATAGCGATGGTCGTGTTGATACATACCGTTTGAACAAATTCCTTCGTTCTAACCAATCCACATGCTTTAACCAAAAACCAATCGTTAATCGTGGCGACCATGTTGTAAAAGGCCAAGTATTGGCTGACGGTCCTGCTACTGATGGCGGTGAATTGGCGTTAGGTTATAACGTTCTTGTAGCGTTCATGCCTTGGGAAGGTTATAACTACGAGGATGCTATCTTGCTTAGTGAAGAACTTTGCAAAGAAGATATCTACACATCCATTCATATTGAAGAATACGAATGTGATGCGCGCGACACTAAATTAGGTGCTGAAGAGATTACTCGTGAATTACCTAATACTGGTGACGACACACTTAAAAACTTAGATGAAGAAGGTATTATCTGCATTGGTGCAGAAGTACATCCTGGCGATATCCTAGTAGGTAAAGCTACACCAAAAGGTGAAACTGAGCTTACTCCAGAGGAACGTTTATTGCGCGCTATCTTTGGCGACAAAGAACGTGAAGTTCGCGACACATCCTTGCGTGTACCTCATGGCGAATCTGGTAAAGTAGTAGACGTTAAAGTCTTCACTCGTGAAAACGGCGACGAATTACAACCAGGTGTAAATAAACTTGTTCGCGTATATATCGCTCAAAAACGTAAGATTCACGAAGGCGATAAAATGGCGGGCCGTCATGGTAACAAAGGTGTCGTTTCTCGCGTTATGAGAAAAGAAGATATGCCATTCCTTCCAGATGGTACTCCAGTACAAATCGTATTGAACCCATTGGGCGTACCTTCTCGTATGAACATCGGTCAGGTTCTTGAAACTCACTTGGGTTGGGCTGTTCAAGGCTTAGGTATGAAAATCAAAGCTACAGACCTTCACATTAAAAATGTGTTGAAAGAAGCTCGTACTGATGCATCTTACTGGGAACAAATCGATGCAATCCGCGATCTTTATGCTCAAATTGAAGCATTGGAAGCAAAAATTGCAGAAGATGTAACAGTAAGCCATTTCAAAGAGAATGAACAAATCATTGCTCTGAAAACTAAAATTCTTAAACATGTAGAAAAAGCAGCACAAAAGAAATTGGATGCTATGGGCGGCGAAGCTCGTTACCAAGAACTTAAAGCTATTGAAGCAAAATACAATGCACTTCATGTAGAATTCTTTGACTCTGAAGAGGATGCTCCAGAAATGGATCCTGTACTTGTAGAAGAATTAGAAGCAATCAATAAAGTTAAGAATACTCTTAACAATATTCATTCTGCTGAAGAAAAACGCATTGAAATCCGCAAAGAGTTGGAAGGTCTTGGCTATGACTTCAAAAAATATGGCATGCCAACACCAGATGTAGCAGGTATTCATATCGCTACACCTGTATTTGATGGTGCACACGAAAAAGACGTATTCGAAACATTAGAAATCGCTGGTCGTCCTGAAAATGGTAAAACAGTATTGTACGATGGTCGTACTGGTGAACCTATGGATAACCACGTAACTGTTGGTTACGTTTACATGCTTAAACTCCATCACTTGGTTGACGACAAAATCCATGCTCGTTCCACAGGTCCGTACTCCCTTGTTACACAACAACCATTGGGCGGTAAAGCTCAGTTCGGTGGTCAACGTTTCGGGGAAATGGAAGTTTGGGCTCTCGAAGCATATGGCGCAGCTTATACACTTCAAGAGCTATTAACTGTTAAGTCTGACGACGTTGTTGGTCGTGTGAAAGCATACGAAAAAATCGTTAAAGGCGAAAATATCCCTGAACCAGGTGTACCTGAGTCCTTCAAGGTATTGCTCAAAGAACTTCAAAGTATTGGTCTTGATGTAAAAATCTTGAATGAAGATCAAGAAGAAGTTGTTATGAAAGAACTTGATGACGAAGATGAAGTGGTAGAAACTGGTATTGAAGAAGTTATGGAAGGCAGTGCAGTAGAAACTGATGAAGTAACTGTAGTAGAACCAGAAGTAGAGGAAGAAGCACCAGCTGACAACGGTGGTGAAGACGATATCCTTAGCCAATTGGCGTTCCCAATGGGCGACTCCTCTAACGATGAAGACTAA
PROTEIN sequence
Length: 1434
MGSKVILKNEMDLALFDVARAGKLRPERCLFHAVIENGRPVCLIGVKANMFKPEQVGKRTRYTYAKINEVIKMPHLLDIQRKSYEWFLESGLQNIFNDISPIKDNSGNLVLSFEGFSLGEPKYDINECKNRDATYAAPLRVNIRLVNNDPENMDIKEQEVFMGDFPLMTDTGTFIINGAERVIVSQLVRSPGVYYNKEIDTMGNRLYDSTVIPNRGAWIELETDASEIVAVRIDRNRKLPATVLVRALGWDTNESILDLFWNGKTDEDGLPIYDERIVRTLEKDTTQSADEALVEIYKKLRPGEPPTVESARNLFDNLFFDARRYDLARVGRYKLNKKLGWRQRMLGHTLAQPIVDPETGEVILDAGVQVGEEQLDIVANSHVFDGEGFAEFYIVNNDGVESKVICNNCNLPFDHRTVTREDMIANISYLLNLMDGAGHTDDIDHLGNRRLRCVGELLQNQFRIGLTRMERVVRERMTIQEIESITPQALINIRPVVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSNYAKVNEFGFIEAPYRKVEKVYGKGADADKVVKVRVSDSVVYMTADEEEGMTIAQANSPLDEEGYFTTEHVACRRGHDVLEVTPDKVDYMDVSPKEVVSIGTAMIPFLENDDANRALMGANMQRQAVPLLRAQAPLVGTGMEYTAATDSGVCVLAREAGKVVRCWGNEIHVLRDSDGRVDTYRLNKFLRSNQSTCFNQKPIVNRGDHVVKGQVLADGPATDGGELALGYNVLVAFMPWEGYNYEDAILLSEELCKEDIYTSIHIEEYECDARDTKLGAEEITRELPNTGDDTLKNLDEEGIICIGAEVHPGDILVGKATPKGETELTPEERLLRAIFGDKEREVRDTSLRVPHGESGKVVDVKVFTRENGDELQPGVNKLVRVYIAQKRKIHEGDKMAGRHGNKGVVSRVMRKEDMPFLPDGTPVQIVLNPLGVPSRMNIGQVLETHLGWAVQGLGMKIKATDLHIKNVLKEARTDASYWEQIDAIRDLYAQIEALEAKIAEDVTVSHFKENEQIIALKTKILKHVEKAAQKKLDAMGGEARYQELKAIEAKYNALHVEFFDSEEDAPEMDPVLVEELEAINKVKNTLNNIHSAEEKRIEIRKELEGLGYDFKKYGMPTPDVAGIHIATPVFDGAHEKDVFETLEIAGRPENGKTVLYDGRTGEPMDNHVTVGYVYMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQELLTVKSDDVVGRVKAYEKIVKGENIPEPGVPESFKVLLKELQSIGLDVKILNEDQEEVVMKELDDEDEVVETGIEEVMEGSAVETDEVTVVEPEVEEEAPADNGGEDDILSQLAFPMGDSSNDED*