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NECEvent2014_5_7_scaffold_154_5

Organism: NECEvent2014_5_7_Clostridium_paraputrificum_30_38

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 16 / 38 MC: 2
Location: 5194..6171

Top 3 Functional Annotations

Value Algorithm Source
Thymidylate synthase {ECO:0000313|EMBL:KJZ86192.1}; EC=2.1.1.45 {ECO:0000313|EMBL:KJZ86192.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 325.0
  • Bit_score: 538
  • Evalue 7.70e-150
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8JDA2_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 325.0
  • Bit_score: 538
  • Evalue 5.50e-150
  • rbh
appF1; Oligopeptide transport ATP-binding protein AppF similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 322.0
  • Bit_score: 537
  • Evalue 2.00e-150

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Taxonomy

Clostridium sp. IBUN13A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 978
ATGGAACAAGAAGTTATACTAAGAGTAGAAAATCTAAAAAAATATTTTCCAATAAAGGGTGGATTTTTTTCTAAAACTATAGGTAATGTAAAAGCTGTTGATGGTGTATCTTTAGAGGTAAGAAAAGGAGAAACTCTAGGAATAGTTGGAGAATCAGGTTGTGGTAAATCTACAACTGGTAGAGCCATACTTCAATTACTTAAGCCTACAGGGGGAAAAGTATACTTTAAAGACCAAGACTTAAGTAAATTAAGTAAGAAGGAAATGAGAGCACTTAGACCTAAGATGCAATTAATATTCCAAGATCCATATTCTTCACTAAATCCGAGAATGACAGTTGGACAAATAATTGGGGAAGCTTTAATAGATCATAAAATGGCTACTAAAGAGAATCTAAGAGAGAAAGTTTTAGAAGTAATGGATCTATGTGGGCTTGCTGAATATCAAATAGATAGATTTCCACATGAATTTTCAGGTGGACAAAGACAAAGAATAGGTATTGCTAGAGCACTAGCACTTGATCCAGAGTTCATTGTTGCAGATGAACCTGTATCTGCACTTGATGTATCTATTCAAGCACAAATTATTAATTTATTAGTTAAACTACAAAAAGAAAAAGGATTCTCATATATGTTCATATCACATGATTTATCTGTTGTTGAACATTTATGCCAAAGAGTTGGAGTTATGTACTTAGGATCAATGGTTGAACTTGCAGATAAGGATGAATTATTTGATAATCCTCTACATCCTTATACAAAGGCATTACTTTCAGCTATTCCAATACCAGATCCAACAATTAAGAGAGACAGAATTATATTAACAGGGGATATACCTTCACCTGCTAATCCTCCAAAGGGGTGCAAGTTCCATACAAGATGTCCATATGCTACTGATAAATGTAAGAAAGAAGCACCTGAATATAGAGAAATTAAAGAAGGACACTTTGTTGCTTGTCATAGAGTTGGAGAAATATAA
PROTEIN sequence
Length: 326
MEQEVILRVENLKKYFPIKGGFFSKTIGNVKAVDGVSLEVRKGETLGIVGESGCGKSTTGRAILQLLKPTGGKVYFKDQDLSKLSKKEMRALRPKMQLIFQDPYSSLNPRMTVGQIIGEALIDHKMATKENLREKVLEVMDLCGLAEYQIDRFPHEFSGGQRQRIGIARALALDPEFIVADEPVSALDVSIQAQIINLLVKLQKEKGFSYMFISHDLSVVEHLCQRVGVMYLGSMVELADKDELFDNPLHPYTKALLSAIPIPDPTIKRDRIILTGDIPSPANPPKGCKFHTRCPYATDKCKKEAPEYREIKEGHFVACHRVGEI*