ggKbase home page

NECEvent2014_5_7_scaffold_96_2

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(1792..2163)

Top 3 Functional Annotations

Value Algorithm Source
YfeD protein n=81 Tax=Escherichia coli RepID=D7JRH9_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 123.0
  • Bit_score: 250
  • Evalue 6.70e-64
yfeD; putative nucleic acid-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 123.0
  • Bit_score: 250
  • Evalue 1.90e-64
Putative nucleic acid-binding transcriptional regulator {ECO:0000313|EMBL:CAR13905.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 123.0
  • Bit_score: 250
  • Evalue 9.30e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGACCACCGAAGAACTGGCTGAATGCCTCGGTGTGGCTAAACAAACTGTTAACCGTTGGATCAGAGAAAAAGGCTGGAAAACGGAAAAATTTCCTGGCGTGAAAGGCGGTCGTGCCAGACTTATTCTGGTCGATACGCAAGTTTGCGAGTTTATTCAGAACACGCCAGCCTTCCATAACACGCCGATGCTTCTGGAAGCCGAAGAACCCCTTGCCGAATACGCACCGGGGATTCGCACTCCTGCTTATCGGCAAATCATCAGCGCAATAGACAACATGACTCACAGTGAGCAGGAAAAAGTTGCGCAATTTTTGTCACGCGAAGGAATTCGTAATTTCCTTGCTCGTCTCGACATAGATGAATCAGAATAA
PROTEIN sequence
Length: 124
MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLLEAEEPLAEYAPGIRTPAYRQIISAIDNMTHSEQEKVAQFLSREGIRNFLARLDIDESE*