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NECEvent2014_5_7_scaffold_96_15

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(17662..18519)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=79 Tax=Escherichia coli RepID=D6ISB6_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 582
  • Evalue 1.70e-163
  • rbh
ypdC; putative DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 582
  • Evalue 4.80e-164
  • rbh
DNA-binding protein {ECO:0000313|EMBL:EQN25974.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 582
  • Evalue 2.40e-163

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGAAAGCACCAGGCTTGCCCGCCGATCAACAATTTTTCGCCGATCTGTTCAGCGGCCTGGTGCTTAACCCGCAACTACTGGGGCGCGTCTGGTTTGCCAGCCAGCCTGCCTCATTGCCAGTGGGCAGTTTATGTATTGATTTTCCCCGTCTGGATATCGTGCTACGCGGCGAATACGGCAATCTGCTGGAAGCAAAGCAGCAACGTATGGTGGAAGGAGAAATGCTGTTTATTCCGGCACGCGCGGCTAATTTACCGGTCAACAACAAACCGGTGATGCTGTTAAGCCTGGTGTTCGCACCGACCTGGCTTGGGTTATCGTTTTACGATAGCCGTACCACGTCGTTGTTGCATCCTGCTCGCCAGATCCAGCTTCCCAGCCTGCAACGCGGTGAAGGTGAAGCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCACCGCTGGAGCAGAATATCATTCAGCCACTGGTGTTAAGTTTGCTGCATCTTTGCCGCAACGTGGTGAATATGCCACCGGGCAATTCGCAGCCGCGCAGCGATTTTCTCTATCACAGCATTTGTAACTGGGTTCAGGATAATTATGCCCAGCCGCTCACCCGCGAGAGCGTGGCGCAGTTTTTTAATATCACGCCCAATCATCTGTCAAAACTGTTTGCCCAACATGGGACGATGCGTTTTATCGAGTATGTTCGCTGGGTGCGAATGGCGAAGGCGAGGATGATTTTGCAGAAATATCATCTGTCGATTCATGAAGTGGCGCAGCGTTGCGGTTTTCCGGATAGCGATTATTTTTGTCGCGTCTTCCGGCGTCAGTTTGGTCTGACGCCGGGAGAGTACAGCGCCCGCTTTCAGGGCTAA
PROTEIN sequence
Length: 286
MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRMVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRNVVNMPPGNSQPRSDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG*