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NECEvent2014_5_7_scaffold_481_7

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(11225..11986)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator YdeO n=87 Tax=Escherichia coli RepID=D6IPV8_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 253.0
  • Bit_score: 515
  • Evalue 3.90e-143
  • rbh
ydeO; transcriptional regulator YdeO similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 253.0
  • Bit_score: 515
  • Evalue 1.10e-143
  • rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ESA78627.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 253.0
  • Bit_score: 515
  • Evalue 5.50e-143

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGTCGCTCGTTTGTTCTGTTATATTTATTCATCATGCCTTCAACGCTAACATTTTAGATAAAGATTACGCCTTCTCTGACGGCGAGATCCTGATGGTAGATAACGCTGTTCGTACGCATTTTGAACCTTATGAGCGGCATTTCAAAGAAATCGGATTTAATGAAAATACCATTAAAAAATATCTACAATGCACTAACATCCAGACAGTGACGGTGCCTGTTCCTGCGAAGTTTTTACGTGCTTCAAATGTACCGACTGGATTGCTTAATGAAATGATTGCTTATCTCAACTCGGAAGAACGCAATCATCATAATTTTTCAGAACTTTTGCTTTTTTCTTGCCTGTCTATTTTTGCCACATGCAAAGGTTTCATTACACTATTAACTAACGGTGTGCTATCCGTTTCCGGGAAAGTGAGAAATATTGTCAACATGAAGCTGGCGCACCCATGGAAGCTGAAAGATATTTGTGACTGCCTGTACATCAGTGAAAGCCTGTTGAAGAAAAAACTAAAGCAAGAGCAAACGACATTCTCACAGATTCTTTTAGATGCCAGAATGCAGCACGCAAAAAATTTGATACGCGTAGAAGGTTCAGTCAATAAAATTGCCGAACAATGTGGTTATGCGAGTACATCTTATTTTATTTATGCGTTCCGCAAACATTTTGGCAACAGTCCAAAGAGAGTTTCTAAGGAGTACCGTTGTCAAAGGCACACGGGTATGAATAAGGGCAACACGATGAATGCTTTAGCTATTTGA
PROTEIN sequence
Length: 254
MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERNHHNFSELLLFSCLSIFATCKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVSKEYRCQRHTGMNKGNTMNALAI*