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NECEvent2014_5_7_scaffold_874_1

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 342..683

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein associated with 30S ribosomal subunit n=74 Tax=Escherichia coli RepID=B7N6I4_ECOLU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 226
  • Evalue 1.20e-56
yfiA; translation inhibitor protein RaiA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 226
  • Evalue 3.50e-57
Ribosomal subunit interface protein {ECO:0000313|EMBL:ESA93848.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 226
  • Evalue 1.70e-56

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGACAATGAACATTACCAGCAAACAAATGGAAATTACTCCGACCATCCGCCAACATGTCGCAGACCGTCTCGCCAAACTGGAAAAATGGCAAACACATCTGATTAATCCACATATTATTCTGTCCAAAGAGCCACAAGGGTTTGTTGCTGACGCCACAATCAATACACCTAACGGCGTTCTGGTTGCCAGTGGTAAACATGAAGATATGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAG
PROTEIN sequence
Length: 114
MTMNITSKQMEITPTIRQHVADRLAKLEKWQTHLINPHIILSKEPQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVKDANFVEEVEEE*