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NECEvent2014_5_7_scaffold_3008_1

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 289..774

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion-like conjugative transfer system protein TraM n=1 Tax=Escherichia coli 53638 RepID=B2U6D8_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 140.0
  • Bit_score: 267
  • Evalue 1.20e-68
Conjugal transfer protein M {ECO:0000313|EMBL:ACL12448.1}; TraM {ECO:0000313|EMBL:ACQ41929.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 311
  • Evalue 9.90e-82
traM; TraM protein similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 127.0
  • Bit_score: 230
  • Evalue 4.50e-58

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGATCCTAGAGGCGCTGCTAGGAGTGTCTTTCTTACTTGTAAACACTATATGCATATTTATAGTGAAAAGTTCATTGCTTAATAATGAAAGGTTTTATCTTATGGCCAGAGTAATTTTGTATATCAGTAATGATGTCTATGATAAAGTAAATGCGATAGTTGAACAGCGTCGTCAGGAGGGGGCAAGAGATAAAGATATAAGTGTTTCGGGAACAGCTTCAATGCTTCTTGAACTGGGGCTTCGTGTATATGAGGCTCAGATGGAGCGTAAAGAGTCTGCGTTTAATCAGACAGAGTTTAATAAACTTCTTCTTGAATGTGTTGTAAAAACACAGTCATCAGTAGCGAAAATTTTGGGTATTGAGTCTCTAAGTCCCCATGTCTCCGGGAATCCAAAGTTTGAATATGCCAATATGGTTGAAGATATTCGTGAGAAGGTGTCATCTGAGATGGAACGATTTTTTCCAAAAAATGATGAGGAATAA
PROTEIN sequence
Length: 162
MILEALLGVSFLLVNTICIFIVKSSLLNNERFYLMARVILYISNDVYDKVNAIVEQRRQEGARDKDISVSGTASMLLELGLRVYEAQMERKESAFNQTEFNKLLLECVVKTQSSVAKILGIESLSPHVSGNPKFEYANMVEDIREKVSSEMERFFPKNDEE*