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NECEvent2014_5_7_scaffold_1821_5

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(4046..4255)

Top 3 Functional Annotations

Value Algorithm Source
IS1 ORF2 n=1 Tax=Shigella flexneri RepID=Q83Q48_SHIFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 145
  • Evalue 1.70e-32
transposase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 145
  • Evalue 4.80e-33
IS1 ORF2 {ECO:0000313|EMBL:ABF05153.1}; TaxID=373384 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri serotype 5b (s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 145
  • Evalue 2.40e-32

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Taxonomy

Shigella flexneri → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAA
PROTEIN sequence
Length: 70
MTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKLLSFSKSVELHDKVIGHYLNIKHYQ*