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NECEvent2014_5_7_scaffold_5023_1

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(3..743)

Top 3 Functional Annotations

Value Algorithm Source
Rhs element Vgr protein n=13 Tax=Escherichia RepID=L2YA92_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 247.0
  • Bit_score: 423
  • Evalue 1.50e-115
VGR-related protein similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 247.0
  • Bit_score: 415
  • Evalue 1.50e-113
FtoM {ECO:0000313|EMBL:AHW84728.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 247.0
  • Bit_score: 415
  • Evalue 7.50e-113

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGGACATCCCGACTCTTAATTTTGACCACTCCCACCACAAATTAAAAATCCGTGGCCTGAGCAGCCCGCCTGATGTGCTCTCCTTTGAAGGCCGCGAGCATCTGAGCCAGCCGTTCTGTTACGACATTCAGTTCACCAGCCGTGATAAAACCCTGGAGCCTGAAGCGGTGCTGATGCAGGACGGCGCGCTCAGCCTCTGCGCCCCGACGGTTCAGGGAATGCCGGTACAGGTGCCGCTGCGCACCCTGTATGGCGTCATCACTGGCTTTAAACAGCTTTCCACCTCGCGCGATGAAACACGCTATGAAGTGCGCCTTGAGCCCCGGCTGGCGCTGCTCGCCCGCAGCCATCAGAACGCCATCTACCAGAACCAGAGCGTGCCGCAGATTGTCGAGAAAATCCTGCGTGAGCGCCACGGGATGCTCGGCCAGGACTTCGTTTTCACCCTGACGGGGGAATATCCGTCGCGCGAACAGGTGATGCAGTTCGGCGAGGACGACCTGACGTTTATCTCCCGGCTGCTGTCGGAGGTGGGGATCTGGTTCCGGTTCAGTACCGACGTGCGGCTGAAAATCGAAGTCATTGAGTTTTATGACGACCAGAGCGGCTATGAACGCGGCCTGATGCTGCCACTGCGCCACCCTTCTGGGCTGAGCGACAGCGGCACGGAATCTGTCTGGGGGCTGAACACGGCATATCATGTGGTGGAAAAAAGCGTCACCACGCGGGACTACAACTAC
PROTEIN sequence
Length: 247
MDIPTLNFDHSHHKLKIRGLSSPPDVLSFEGREHLSQPFCYDIQFTSRDKTLEPEAVLMQDGALSLCAPTVQGMPVQVPLRTLYGVITGFKQLSTSRDETRYEVRLEPRLALLARSHQNAIYQNQSVPQIVEKILRERHGMLGQDFVFTLTGEYPSREQVMQFGEDDLTFISRLLSEVGIWFRFSTDVRLKIEVIEFYDDQSGYERGLMLPLRHPSGLSDSGTESVWGLNTAYHVVEKSVTTRDYNY