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NECEvent2014_5_7_scaffold_4234_3

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(1279..1542)

Top 3 Functional Annotations

Value Algorithm Source
Clp protease family protein n=8 Tax=Escherichia coli RepID=M9GDQ5_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 170
  • Evalue 8.10e-40
Minor capsid protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 170
  • Evalue 2.30e-40
Minor capsid protein C {ECO:0000313|EMBL:ELE58172.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 170
  • Evalue 1.10e-39

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
GCGGTTGCGGCAGAAAACAGTCGCATTATGGGGATCCTCAACTGTGAGGAGGCTCACGGACGCGAAGAACAGGCACGCGTGCTGGCCGAAACCCCCGGTATGACCGTGGAAACGGCCCGCCGCATTCTGGCAGCTGCACCACAGAGTGCACAGGCGCGCAGTGACACTGCGCTGGATCGTCTGATGCAGGGGGCACCGGCACCGCTGGCTGCAGGTAACCCGGCATCTGATGCCGTTAACGATTTGCTGAACACACCAGTGTAA
PROTEIN sequence
Length: 88
AVAAENSRIMGILNCEEAHGREEQARVLAETPGMTVETARRILAAAPQSAQARSDTALDRLMQGAPAPLAAGNPASDAVNDLLNTPV*