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NECEvent2014_5_7_scaffold_5461_2

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 312..629

Top 3 Functional Annotations

Value Algorithm Source
IncF plasmid conjugative transfer protein TrbD n=27 Tax=Escherichia coli RepID=D7JJ62_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 210
  • Evalue 8.60e-52
Conjugal transfer protein TrbD {ECO:0000313|EMBL:EOU85772.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 210
  • Evalue 1.20e-51
trbD; conjugative transfer protein similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 103.0
  • Bit_score: 188
  • Evalue 7.50e-46

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGAACATGCGTAATATTAATGTTATTACTGCCCGCGCTGTGCCGGATAAAAACGTATCAGATGATTTTATGCATGCTGTTCTCAGTAACTGCACCACAAGAATCGCACTTCCTGCGCCGAAGAAATTCAGTTCTGAATCATTGCCGCACAATTTTAATATGGCTGCTGTCGGAGTGATGAAGAAGGGTATGTCGATGAGTTTATTTTCTTCTCCGGGAAATACAGTAGTCTCCGGACAACCCTGTGCAGGAAAAACAAATCTGACAGTAGAGTTAATTTCTGCTGTTGTGGAGAGTAATAAAAAAGGAGAAGGGTAA
PROTEIN sequence
Length: 106
MNMRNINVITARAVPDKNVSDDFMHAVLSNCTTRIALPAPKKFSSESLPHNFNMAAVGVMKKGMSMSLFSSPGNTVVSGQPCAGKTNLTVELISAVVESNKKGEG*