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NECEvent2014_5_7_scaffold_5550_1

Organism: NECEvent2014_5_7_Escherichia_coli_50_56_partial

partial RP 29 / 55 MC: 4 BSCG 28 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(166..666)

Top 3 Functional Annotations

Value Algorithm Source
PrfX protein n=134 Tax=Escherichia coli RepID=Q8GA06_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 334
  • Evalue 8.10e-89
  • rbh
PapX protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 334
  • Evalue 2.30e-89
MarR family transcriptional regulator {ECO:0000313|EMBL:EQP45676.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 334
  • Evalue 1.10e-88

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGAATAACACAGACACATTAGAAAAAATAATCAGACACCAAAAAAACAAAGACCCCGCATATCCCTTTCGGGAGCATTTGTTGATGCAACTCTGTATTCGCACAAATAAAAGAATGCAGGATAATATATCTGAATTTCTGGGGGTGTATGGAATAAATCACTCAGTATATATGGTTCTCACCACATTATTCGCAGCGGAGAGTCATTGTCTGTCACCTTCAGAGATAAGCCAGAAACTTCAGTTTACCAGAACTAATATTACCCGCATTACAGATTTTTTAGAAAAAGCCGGATATGTAAAAAGGATGGATAGCAGGGAGGATCGCCGTGCTAAAAAAATCAGTCTGACATCTGAAGGTATGTTTTTTATTCAGAGGCTCACTCTTGCACAAAGCATGTATCTGAAAGAAATCTGGGGTTATCTGACCCATGATGAACAGGAACTGTTTGAAGTCATTAATAAAAAATTACTGGCGCATCTTGATGATGTCAGCTCATAA
PROTEIN sequence
Length: 167
MNNTDTLEKIIRHQKNKDPAYPFREHLLMQLCIRTNKRMQDNISEFLGVYGINHSVYMVLTTLFAAESHCLSPSEISQKLQFTRTNITRITDFLEKAGYVKRMDSREDRRAKKISLTSEGMFFIQRLTLAQSMYLKEIWGYLTHDEQELFEVINKKLLAHLDDVSS*