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NECEvent2014_5_7_scaffold_397_12

Organism: NECEvent2014_5_7_Peptoclostridium_sordelli-rel_28_6

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 13 / 38
Location: 6699..7355

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E9Z0_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 218.0
  • Bit_score: 430
  • Evalue 8.30e-118
  • rbh
RNA polymerase sigma factor SigI {ECO:0000313|EMBL:CEN23902.1}; RNA polymerase sigma factor SigI,RNA polymerase sigma factor sigI,putative RNA polymerase sigma factor SigI,RNA polymerase sigma-I facto similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 218.0
  • Bit_score: 431
  • Evalue 8.90e-118
RNA polymerase sigma factor SigI similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 218.0
  • Bit_score: 229
  • Evalue 7.90e-58

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Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 657
ATGGATTTAAAGACTGATAACTTAAAAGATATTGACAGCAATGAATTTATAAAAGAACATATACCATTTATAATAAAGACAATAAATGAGATTACAGGAAGATATATATGTTTAGATAATGATGAAGAAATTAGTATTGGACTGTTAGCTTTTAATGAAGCTAGACAAAAATATGATTACTCTAAAGGGCATTTCCTACCTTATGCAAAGTTAGTTATAAAAAGTAGAATTTTAAACTATTTAAGAAAAGAGAAAAATAATAACTTGAAAGAATCCTTAGAAAAGCTTAGAGAAGATGGTTTTGATTTTAGTCAAGAATTGTATAATCCCATAGAAAACCAAGATATATTAATCGAAGAAATGAATATTTTAAAAACAACTATAAAAGACTTTGGATTTGAACTAGATGATTTAGTAGAAGAATCTCCAAAACATAAAGATACTAGAAATAGGGCTATTGATTTATCAAAGAAAATAAATGATGATAACAAAATAAAAGAATCTATGTACACAAAAAGACGGTTACCTATAAAGGAGATATCTATTAAATATGTTATAAGCCAAAAGATAATTAAGGGAAGTAAAAAGTTTATTATAACAGTTGTTATAGTTCTTGATAAAAATCTAAGAAATTTGAAGTTATGGGTAAGAAAGTAG
PROTEIN sequence
Length: 219
MDLKTDNLKDIDSNEFIKEHIPFIIKTINEITGRYICLDNDEEISIGLLAFNEARQKYDYSKGHFLPYAKLVIKSRILNYLRKEKNNNLKESLEKLREDGFDFSQELYNPIENQDILIEEMNILKTTIKDFGFELDDLVEESPKHKDTRNRAIDLSKKINDDNKIKESMYTKRRLPIKEISIKYVISQKIIKGSKKFIITVVIVLDKNLRNLKLWVRK*