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NECEvent2014_5_7_scaffold_2001_3

Organism: NECEvent2014_5_7_Peptoclostridium_sordelli-rel_28_6

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 13 / 38
Location: comp(2865..3368)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor sigV n=2 Tax=Clostridium sordellii RepID=T0CV39_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 328
  • Evalue 4.50e-87
  • rbh
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CEQ22508.1}; RNA polymerase sigma-70 factor,RNA polymerase sigma factor sigV,RNA polymerase sigma factor,RNA polymerase sigma-70 factor,Sigma-70, regio similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 328
  • Evalue 6.20e-87
sigV; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 157.0
  • Bit_score: 193
  • Evalue 6.30e-47

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Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 504
ATGAATATATTGAGCTCAAGCAAAAAAATAAAAGAATCAAAAGTAAAAGACTATATAGTTGAAAATCAAGAAAGGTTTTACAAAATAGCATACAGTTATGTCAAAAACGAAGATGACGCATTAGATATTGTACATGATGCTATATGTAAGGCACTTCAAAAAATAGATACGCTTAAAAATATAGAAGTAGTTAAAACTTGGTTTTATAAAATATTAGTAAATAGCGCTATAGATTATATAAGAAAAAACAACAAGTATGTAAGCTTAAGTCAAGAAGATATGATAAATGAAAAAATATCAAATGATATATATTCTGATATAGATCTTGAACAAGCACTAGATAGGCTTCCGGAAGAGTACAAAAGTATAATAATGTTGAGATACTTTGAGGATATGAAAATAGAAGAAATAGCTAATGTTTTACAACAAAACATTAACACTGTGAAAACAAAATTATACAAAGGGTTAAGACGGCTTAAAATAAAAATAAATACAGAGGATTAG
PROTEIN sequence
Length: 168
MNILSSSKKIKESKVKDYIVENQERFYKIAYSYVKNEDDALDIVHDAICKALQKIDTLKNIEVVKTWFYKILVNSAIDYIRKNNKYVSLSQEDMINEKISNDIYSDIDLEQALDRLPEEYKSIIMLRYFEDMKIEEIANVLQQNINTVKTKLYKGLRRLKIKINTED*