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NECEvent2014_5_7_scaffold_4739_1

Organism: NECEvent2014_5_7_Peptoclostridium_sordelli-rel_28_6

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 13 / 38
Location: comp(2..676)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein n=2 Tax=Clostridium sordellii RepID=T0DVC3_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 225.0
  • Bit_score: 431
  • Evalue 5.00e-118
  • rbh
RpiR family transcriptional regulator {ECO:0000313|EMBL:CEN76810.1}; RpiR family transcriptional regulator,Uncharacterized HTH-type transcriptional regulator ybbH,DNA-binding transcriptional repressor similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 225.0
  • Bit_score: 431
  • Evalue 7.10e-118
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 225.0
  • Bit_score: 355
  • Evalue 1.30e-95

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Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 675
ATGGGAATTATAGAAAATTTAGAATCACCAAATTTCAAAGTTACAAAATCGGATAAAATACTCATAGAGTATATTAAAAATAATATAGAGGATGTTTTTTACAAGCCAATATCTCAAATTGCTAAAGAAAGTAATATAGGAGAAGCAACAATAACTAGATTTTCAAAGAAAATGGGATTTAATGGATTACAAGATTTTAAAGTTACTTTAGCTCAAGAAATTTCTAGTTTAAGTAAAAATAAAAATATAATAAATAGTAATATAGAAAATAATGAACCAGTTGTAGATACAGCTAAAAAATTATTAATATCTAACATAAACACACTAGAAAGTACAGTGGATATAATTAATGGTCAAGATATTCATAAAAGCTCACAATTAATCATTAATGCAAAGAAAATTTATTTTGTTGGTATAGGATACTCAGGAATTATCGCACAAGACTCTAATTATAAATTTATGAGAATTGGATTAAATTGTGTAAGTTTTGATAGCAGTCACACTATGATCATGATGGCATCTATAATGGAAAAGGGGGATTTATTAATAGCTATATCTCACTCAGGAGAAACTGATGAAATTATAAAGACAGTTAAACTTGCAAAAGAAAATGAAGTAGATGTTATTTCTATTACTAAGAAAAAGGAATCTAGTTTAAAAGATATATCAGATATA
PROTEIN sequence
Length: 225
MGIIENLESPNFKVTKSDKILIEYIKNNIEDVFYKPISQIAKESNIGEATITRFSKKMGFNGLQDFKVTLAQEISSLSKNKNIINSNIENNEPVVDTAKKLLISNINTLESTVDIINGQDIHKSSQLIINAKKIYFVGIGYSGIIAQDSNYKFMRIGLNCVSFDSSHTMIMMASIMEKGDLLIAISHSGETDEIIKTVKLAKENEVDVISITKKKESSLKDISDI