ggKbase home page

NECEvent2014_5_7_scaffold_4235_2

Organism: NECEvent2014_5_7_Peptoclostridium_sordelli-rel_28_6

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 13 / 38
Location: comp(452..1000)

Top 3 Functional Annotations

Value Algorithm Source
Phage integrase family protein n=1 Tax=Clostridium difficile P51 RepID=T4RPT7_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 182.0
  • Bit_score: 268
  • Evalue 6.00e-69
Site-specific recombinase XerD {ECO:0000313|EMBL:CEO05978.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordel similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 182.0
  • Bit_score: 373
  • Evalue 2.40e-100
site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 182.0
  • Bit_score: 225
  • Evalue 9.60e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 549
ATGAACTATGTAGAACCTATTAGAAATTTAGATACATTAGAAAATATGTGTTCCTATTTAAAAAAGACAAATGAAAGAGACTACCTTCTATTTATGATGGGTATATATACAGGTCTTAGAGTATCAGATATATTAAAGTTTAGAATATATGATGTAAAAGATAAAAGGCAAATAGTCTTAAGAGAAAAGAAAACAGGGAAACAAAAATTCATAGAGATAAACCCAATACTGAAAAGAGCAATTAAAGATTATGTAGAGAACAAGGATCCTGATGATTTTTTAATTAAATCACGTAAAAACTATAATAGACCTATCTCTAGAGAAAGGGCATATGTAATTTTAAAAGAGTTGGGAGAATTATTTGATGTTCCTTGTTTAGGAACTCATAGTATGAGAAAAACATGGGGATATCATTACTATAAGCAAACCAAAGATATAGCATTACTTCAGAAGATATTTAACCATTCATCTCCAGCTGTAACCTTACATTATATAGGTATAGACCAAGACAGAATGAATAAAGCTTATACGAGCTTTAGATATTTTTAA
PROTEIN sequence
Length: 183
MNYVEPIRNLDTLENMCSYLKKTNERDYLLFMMGIYTGLRVSDILKFRIYDVKDKRQIVLREKKTGKQKFIEINPILKRAIKDYVENKDPDDFLIKSRKNYNRPISRERAYVILKELGELFDVPCLGTHSMRKTWGYHYYKQTKDIALLQKIFNHSSPAVTLHYIGIDQDRMNKAYTSFRYF*