ggKbase home page

NECEvent2014_5_7_scaffold_3500_4

Organism: NECEvent2014_5_7_Peptoclostridium_sordelli-rel_28_6

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 13 / 38
Location: comp(1656..1880)

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CPS8_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 80.0
  • Bit_score: 149
  • Evalue 1.30e-33
Triple helix repeat-containing collagen {ECO:0000313|EMBL:CEN31783.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 160
  • Evalue 7.60e-37
LPXTG-motif cell wall anchor domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 52.0
  • Bit_score: 80
  • Evalue 2.60e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 225
GGCGAAGCTGGTTCTCAAGGTCCTAAAGGTGAAAAAGGTGAAGCTGGTTCTCAAGGTCCTAAAGGTGAAAAAGGTGAAGCTGGTTCTCAAGGTCCTAAAGGTGAAAAAGGTCCTAAGGGTGAAAAGGGTGAAGTTGGTCCTTCATCAAAACCCGCTCCTGTGCCTTATAATCCTGAAAAGAAAAAGAAACTATATACTAATAAAAAAGATCCTTATAACAAATAA
PROTEIN sequence
Length: 75
GEAGSQGPKGEKGEAGSQGPKGEKGEAGSQGPKGEKGPKGEKGEVGPSSKPAPVPYNPEKKKKLYTNKKDPYNK*