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NECEvent2014_5_7_scaffold_5106_1

Organism: NECEvent2014_5_7_Propionibacterium_HGH0353-rel_63_4_partial

partial RP 26 / 55 MC: 2 BSCG 20 / 51 ASCG 5 / 38
Location: 3..488

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 161.0
  • Bit_score: 324
  • Evalue 6.70e-86
tRNA pseudouridine synthase A n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X4R6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 161.0
  • Bit_score: 324
  • Evalue 4.80e-86
  • rbh
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 161.0
  • Bit_score: 316
  • Evalue 3.60e-84

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 486
GACGGGTCCTCCCGACCCGATCCGCTGACGCGATTCCACGTGGCATCCGTACGAGGGCACCTCGATCTTGACCGCCTCAATACGGCCGGCGATTCCCTTCTCGGGCTGCACGATTTCGCCGCCTTCTGCAAGTACCGCGAGGGCGCGACAACCATCCGCACCCTCTTGGACTGCCACGCCGAACGCCTCGAAGACCCGTGCGGGACCATCGAGGTGACCGTCCGGGCCGACGCCTTCTGCCACTCCATGGTGAGGTCCCTCATCGGAGCTCTGACGGCCGTCGCCTCCGGCCGCCGCGACCAGCACTGGCTCGACGAGGTCGCCGCCAGCACGTCGCGGGCGTCGTCGGTGCTCGTCATGCCAGCTTGCGGACTCACCCTGGAAGAGGTCGGCTACCCAGCCGAGGAAGCCCTTGCCGAGCGTGCCGCCCAAGCGCGTTCCCGTCGACGCCACGACGAACTCTGCGACACCTGTTGGGAGGACTGA
PROTEIN sequence
Length: 162
DGSSRPDPLTRFHVASVRGHLDLDRLNTAGDSLLGLHDFAAFCKYREGATTIRTLLDCHAERLEDPCGTIEVTVRADAFCHSMVRSLIGALTAVASGRRDQHWLDEVAASTSRASSVLVMPACGLTLEEVGYPAEEALAERAAQARSRRRHDELCDTCWED*