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NECEvent2014_5_7_scaffold_1052_5

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(3845..4786)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 313.0
  • Bit_score: 614
  • Evalue 1.10e-172
Ribosomal RNA small subunit methyltransferase H n=45 Tax=Pseudomonas RepID=RSMH_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 313.0
  • Bit_score: 614
  • Evalue 7.60e-173
  • rbh
16S rRNA m(4)C1402 methyltransferase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 313.0
  • Bit_score: 614
  • Evalue 2.10e-173

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGAATGCCACCTACCGCCATATCACCGTTCTGCTCGAGGAGGCCGTTTCCGCACTGGCCCCGCGGGAGGACGGCTGCTATCTGGACGGTACCTTCGGAAGAGGGGGCCATAGTCGAGCCTTGCTCGAGAAACTGGGCGCCGGGGGACGCCTGCTCGGATTCGACAAAGATCCCCAGGCCATCCAGACAGGAAAAGCATTGGCGGCCGAAGACGGCCGCTTCGTCATTGTGCAGCGCTCGTTCGCCGAACTGGGCGATGAGGTGCGCGCACGCGGTCTCGAAGGGCGGGTCGATGGCGTCCTGCTCGACCTTGGCGTGTCGTCGCCGCAACTCGACGATCCCGAGCGCGGCTTCAGCTTCCTCAACGATGGTCCGCTGGACATGCGCATGAATCCCGGCCAGGGCATCAGCGCAGCGGAGTTCATCGCCAACGCCACCGAAGAGGAAATCGCCCGGGTCTTCAAGGAATATGGCGAAGAACGCTTCGCCAAGCGGATGGCCCGCGCCATCGTGCAGCGCCGTCAGGAGCGGCCGTTCGAACGAACTGCCGATCTCGCCGAAGTGATCACGGTTGCCAACCCCGCCTGGGAGAAGGGCAAGAATCCGGCGACCCGCGCATTCCAGGGCCTGCGCATCCATGTGAACAATGAGCTGGGCGATCTCGAGCGTGGCCTTGACGCCGCGCTCGAATCGCTGGCCGTCGGCGGCCGGCTGGTGGTGATCAGTTTCCATTCCCTGGAAGACCGCATCGTCAAGCTGTTCATGCGCAAGCACGCCAAGGGCGAGGCGGACAACCTGCCGCGCGACCTGCCGATCCGTTCCAAGGTCTTCGAGCCGCGCCTGAAGCTGCTGGGCAAGCCGCAGTACGCTTCGGAAGAAGAACTCAAGGCCAACCCGCGCTCGCGCAGCGCGGTCATGCGCGTGGCGGAGAAGCTGAGATGA
PROTEIN sequence
Length: 314
MNATYRHITVLLEEAVSALAPREDGCYLDGTFGRGGHSRALLEKLGAGGRLLGFDKDPQAIQTGKALAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLLDLGVSSPQLDDPERGFSFLNDGPLDMRMNPGQGISAAEFIANATEEEIARVFKEYGEERFAKRMARAIVQRRQERPFERTADLAEVITVANPAWEKGKNPATRAFQGLRIHVNNELGDLERGLDAALESLAVGGRLVVISFHSLEDRIVKLFMRKHAKGEADNLPRDLPIRSKVFEPRLKLLGKPQYASEEELKANPRSRSAVMRVAEKLR*