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NECEvent2014_5_7_scaffold_1977_4

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(1355..1861)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=119 Tax=Pseudomonas RepID=GREB_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 339
  • Evalue 1.90e-90
  • rbh
Transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 339
  • Evalue 5.50e-91
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteob similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 339
  • Evalue 2.70e-90

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGAGTCGCTATCGTCCACCGCGCACCGCCGGCACCCCGCTGATCACTCCGGAGGGCGCCGCGCGGTTACGCGCAGAGCTGCATGAACTCTGGCACGTGCGCCGTCCCCAGGTGACCCAGGCGGTCAGCGAAGCCGCCGCCCTCGGCGATCGCTCGGAAAACGCCGAATACATCTACGGCAAGAAGATGCTGCGCGAGATCGACAGTCGCGTGCGCTTCCTGCGCAAGCGCCTGGAGAACCTGAAAGTGGTCGGCGAGCGGCCGGCGGATCCGAACCGGGTGTACTTCGGCGCCTGGGTGACCCTGGAAGACGAAGACGGCGAGCAGGCCCGCTATCGCATCGTCGGCCCCGACGAACTGGACCTGCGCAACAACCAGATCAGCATCGACTCGCCGCTCGCCCGCGCACTGGTCGGCAAGGAGCTGGACGCCGAGGTGCTGGTGCGCACCCCGGCCGGGGAAAAGCTCTGGTTCGTCGTCGAGATCGAGTATCCGCCGGCGCCCTGA
PROTEIN sequence
Length: 169
MSRYRPPRTAGTPLITPEGAARLRAELHELWHVRRPQVTQAVSEAAALGDRSENAEYIYGKKMLREIDSRVRFLRKRLENLKVVGERPADPNRVYFGAWVTLEDEDGEQARYRIVGPDELDLRNNQISIDSPLARALVGKELDAEVLVRTPAGEKLWFVVEIEYPPAP*