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NECEvent2014_5_7_scaffold_1323_3

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 1011..2615

Top 3 Functional Annotations

Value Algorithm Source
High-affinity choline uptake protein BetT n=39 Tax=Pseudomonas aeruginosa RepID=U6AF17_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 534.0
  • Bit_score: 1068
  • Evalue 0.0
  • rbh
High-affinity choline uptake protein BetT similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 534.0
  • Bit_score: 1068
  • Evalue 0.0
Choline transporter BetT {ECO:0000313|EMBL:ETU76311.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeru similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 534.0
  • Bit_score: 1068
  • Evalue 0.0

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1605
ATGAGTACTGCTTCGCCAATAAAAACAAACGAGCAGGTACGTCTGAATCCGATCGTGTTCTTCGGCTCGACCGCACTGATCCTGGTTCTGACCGCCGCCCTCATCCTCTATCCCGACAGCGCCGGAGCCTTGCTCGGCCGCATCCAGGCGTGGCTGTCGCACAGCTTCGGCTGGTACTACATGCTGGCCATCGGCGCCTACCTGTTCTTCGTCGCCTGGGTGGCCTTCTCGCGCTTCGGCACCCTCAAGCTCGGCGAGGAGCATGAAAAGCCGGACTTCAGCTACGGCGCCTGGGCCGGCATGCTGTTCTCCTCCGGGATCGGCATCTCGCTGCTCTACTTCGCCGCATCCGAGCCGATCGACCACCTCTACCATCCACCCGAAGGCGTTCCCGGCAGCCCTCAGGCGGCGCGCCAGGCGCTGCAACTGACCTTCCTCCACTGGGGCCTGCACGGTTGGGCGATCTATGCCCTGGTCGGCCTCGCCGTCGGTTATTTCGCCTACCGCCATCGCCAGCCGCTGGCGTTGCGCTCGGCGCTCTATCCGATCCTCGGCGAGCGCTGGGTGAAAGGCGCCGCGGGCCACGCGGTGGATTGCTTCGGCATCTTCGTCACCCTTCTCGGGCTGGTGACCAACCTGGGCATCGGCGCCTTGCAGGTGTCGTCCGGTCTCGAGTACCTGACCGGCATGCCGCACAGCAAAGGCACCCTGCTGGCGGTGATCCTGGCGATGAGCCTGGTCGCCACCCTGGCGGCGGTCTCCGGTGTCGAGAAAGGCATCCGCCGGCTGTCCAACCTGAATATCGTGCTGTTCAGCTCGCTGCTGCTGTTCGTGCTGGTCTGCGGTTCGACCCTGGAACTGCTCAACGGCTTCGTACAGAACCTCGGCGACTATCTCGACGGCCTGGTGCTGAAGACCTTCGACCTCTACGTCTACACCGGTGCCGGCGCCGGCAAGAGCGAGGAATGGCTGGGCCTGTGGACCCTGTTCTACTGGGCCTGGTGGATTTCCTGGGCGCCCTTCGTCGGTATGTTCATCGCCCGCATCTCCCGCGGTCGCAGCGTGCGCGAACTGGTCTGCGGGGTGCTGCTGATCCCGCTGGGCTTCACCCTGGCCTGGCTGTCGGTATTCGGCAACAGCGCCCTGGACCTGGTGATGAACCACGGCGCGACCGACCTGGGCAAGGCCGCGCTGGAACAGCCGTCGATGTCGATCTACCTGCTGCTGGAACACTATCCGCTGTCGAAGATCGTCATCGGCCTGTCGATCTTCGTCGGCTTCGTGCTGTTCCTCACCCCGGCGGATTCCGGCTCGGTGATGCTGGCCAATCTCTCGCGCAGCGGCGGCGAGCTGGACGAGGACGCGCCGAACTGGCTGCGTATCCTCTGGTCGGCCGTCGTCACGCTAGTCACCATCGGCCTGCTGTTCGCCGGCAACTTCACGGCGATGCAAACCGTCGTGGTGCTCGCCGGGCTGCCGTTCTCGGCGGTGCTGATCCTGTTCATGTTCGGCCTGCACAAGGCCATGCGCGCCGACTACGAGGCCCAGGTCGGCGACCGCCGCACCTACCAGCCGGTGCCGGCGCCAACCCAGCCCCAGACCTGA
PROTEIN sequence
Length: 535
MSTASPIKTNEQVRLNPIVFFGSTALILVLTAALILYPDSAGALLGRIQAWLSHSFGWYYMLAIGAYLFFVAWVAFSRFGTLKLGEEHEKPDFSYGAWAGMLFSSGIGISLLYFAASEPIDHLYHPPEGVPGSPQAARQALQLTFLHWGLHGWAIYALVGLAVGYFAYRHRQPLALRSALYPILGERWVKGAAGHAVDCFGIFVTLLGLVTNLGIGALQVSSGLEYLTGMPHSKGTLLAVILAMSLVATLAAVSGVEKGIRRLSNLNIVLFSSLLLFVLVCGSTLELLNGFVQNLGDYLDGLVLKTFDLYVYTGAGAGKSEEWLGLWTLFYWAWWISWAPFVGMFIARISRGRSVRELVCGVLLIPLGFTLAWLSVFGNSALDLVMNHGATDLGKAALEQPSMSIYLLLEHYPLSKIVIGLSIFVGFVLFLTPADSGSVMLANLSRSGGELDEDAPNWLRILWSAVVTLVTIGLLFAGNFTAMQTVVVLAGLPFSAVLILFMFGLHKAMRADYEAQVGDRRTYQPVPAPTQPQT*