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NECEvent2014_5_7_scaffold_1205_6

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(4175..5032)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 579
  • Evalue 4.10e-163
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 579
  • Evalue 2.00e-162
tRNA pseudouridine synthase A n=104 Tax=Pseudomonas RepID=TRUA_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 579
  • Evalue 1.40e-162
  • rbh

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGAACGATGTTGTTCCGCCAGCGGCAGCCGAATCGGCTGCCGCTGGCGTTTCCAGAATCGCCCTCGGCATCGAGTACAAGGGCTCCCGCTATCGTGGCTGGCAGCGCCAGGAAGCCGGCGTGCCTTCCGTGCAGGAAGCGCTGGAGCGCGCCTTGTCGAAGGTTGCCGCCGAGCCGGTCGGGGTGATCTGCGCCGGCCGTACCGACGCTGCCGTTCATGCCAGCGGCCAGGTGGTGCATTTCGACACCGCGGTGGAGCGCCCGTTGAAAGCATGGGTGATGGGCACCAACGCCAACCTGCCCGCGGATATCAGTGTGACCTGGGCGAGGGTGATGCCGGCGCATTTCCACGCGCGCTTCTCGGCCATGGCCCGGCGCTATCGCTACGCCATCTACAACGATCCGATCCGCCCGGCGCACCTGGCCGAGGAGGTCACCTGGAACCATCGGCCGCTGGATATCGGGCGGATGCGCGAGGCGGCCCAGGTACTGGTCGGCACCCATGACTTCACCTCGTTCCGGGCGGTGCAGTGCCAGGCCAAGTCGCCGGTCAAGACCATGCATCACGTGCGCTTGCTGGAGCATGGTCGGTTGATCGTGCTGGACATCCGCGGTAACGCTTTCCTTCACCATATGGTGCGCAACATCGCTGGCGTCCTGATGACCATCGGTGCCGGCGAGCGGCCGATCGAATGGGCGAAGGAGGTGCTCGAGGCGCGCGACCGGCGCGCCGGTGGGGTCACCGCTCACCCCTACGGACTCTATCTGGTGCGGGTGGAGTACCCCGGGGAGTTCGAGTTGCCCGAGCGCTACCTGGGGCCGCATTTCCTTTCCGGATTGCCCGATATCGTCGGCTGA
PROTEIN sequence
Length: 286
MNDVVPPAAAESAAAGVSRIALGIEYKGSRYRGWQRQEAGVPSVQEALERALSKVAAEPVGVICAGRTDAAVHASGQVVHFDTAVERPLKAWVMGTNANLPADISVTWARVMPAHFHARFSAMARRYRYAIYNDPIRPAHLAEEVTWNHRPLDIGRMREAAQVLVGTHDFTSFRAVQCQAKSPVKTMHHVRLLEHGRLIVLDIRGNAFLHHMVRNIAGVLMTIGAGERPIEWAKEVLEARDRRAGGVTAHPYGLYLVRVEYPGEFELPERYLGPHFLSGLPDIVG*