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NECEvent2014_5_7_scaffold_1766_5

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 2889..3155

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 175
  • Evalue 2.70e-41
DNA-directed RNA polymerase subunit omega n=133 Tax=Pseudomonas RepID=RPOZ_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 175
  • Evalue 2.00e-41
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 175
  • Evalue 5.50e-42

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGGCCCGCGTCACCGTTGAAGACTGCCTGGACAACGTCGATAACCGTTTCGAGCTGGTCATGCTCGCCACCAAGCGCGCCCGTCAGCTGGCTACCGGCGGCAAGGAGCCGAAAGTGGCCTGGGAAAACGACAAGCCGACCGTCGTCGCCCTGCGCGAGATCGCTTCCGGCCTGGTCGATGAGAACGTCGTCCAGCAGGAAGACATCGTCGAGGACGAACCGCTGTTCGCAGCGTTCGACGACGAGGCCAACACCGAGGCCCTGTAA
PROTEIN sequence
Length: 89
MARVTVEDCLDNVDNRFELVMLATKRARQLATGGKEPKVAWENDKPTVVALREIASGLVDENVVQQEDIVEDEPLFAAFDDEANTEAL*