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NECEvent2014_5_7_scaffold_4613_3

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(576..1214)

Top 3 Functional Annotations

Value Algorithm Source
NalD n=116 Tax=Pseudomonas RepID=E2ZXX1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 212.0
  • Bit_score: 428
  • Evalue 3.10e-117
  • rbh
Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 212.0
  • Bit_score: 428
  • Evalue 8.70e-118
NalD {ECO:0000313|EMBL:CEI05799.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI76021.1}; TetR family transcriptional regulator {ECO:0000313|EMBL:AKE68336.1}; TetR/AcrR family t similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 212.0
  • Bit_score: 428
  • Evalue 4.30e-117

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGCGACGCACAAAGGAAGATTCTGAAAAAACCCGTACGGCCATCCTCCTGGCCGCCGAGGAACTGTTCCTGGAAAAGGGCGTGTCCCATACCAGCCTGGAACAGATCGCCAGGGCCGCCGGGGTGACCCGTGGCGCCGTCTACTGGCACTTCCAGAACAAGGCCCACCTGTTCAACGAGATGCTCAACCAGGTACGCCTGCCGCCGGAGCAACTCACCGAGCGCCTGTCCGGCTGCGATGGCAGCGACCCGCTGCGCTCGCTCTACGACCTCTGCCTGGAGGCCGTGCAATCGTTGCTGACGCAGGAGAAGAAGCGCCGCATCCTGACCATCCTGATGCAACGTTGCGAATTCACCGAGGAACTGCGCGAGGCGCAGGAACGCAACAACGCCTTCGTGCAGATGTTCATCGAACTCTGCGAGCAGTTGTTCGCCCGCGACGAATGCCGTGTGCGGCTGCATCCGGGCATGACCCCGAGGATCGCCTCGCGCGCCTTGCACGCGCTGATCCTGGGCCTGTTCAACGACTGGTTGCGCGACCCGCGCCTGTTCGATCCGGATACGGACGCGGAACACCTGCTGGAGCCGATGTTCCGTGGCCTGGTGCGCGACTGGGGTCAGGCCAGCTCGGCGCCGTAG
PROTEIN sequence
Length: 213
MRRTKEDSEKTRTAILLAAEELFLEKGVSHTSLEQIARAAGVTRGAVYWHFQNKAHLFNEMLNQVRLPPEQLTERLSGCDGSDPLRSLYDLCLEAVQSLLTQEKKRRILTILMQRCEFTEELREAQERNNAFVQMFIELCEQLFARDECRVRLHPGMTPRIASRALHALILGLFNDWLRDPRLFDPDTDAEHLLEPMFRGLVRDWGQASSAP*