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NECEvent2014_5_7_scaffold_4793_1

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(3..479)

Top 3 Functional Annotations

Value Algorithm Source
RadC-like protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WF92_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 307
  • Evalue 7.70e-81
  • rbh
DNA repair protein RadC {ECO:0000313|EMBL:EPD37380.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 159.0
  • Bit_score: 288
  • Evalue 5.20e-75
DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 159.0
  • Bit_score: 280
  • Evalue 2.20e-73

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Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGTCGCAACTGTCCTTTTCCTCGTTCAATGCCTCGCTGATGGTGCGCGACGCACAGGGCCGCTACCTGCTGGCGACGGCCGACCAGATTCTGGAGGCCGCGCGCCAGGCCATCGAGCACAAGATGCAACGCGGTGCGTCGTTCAGTTCGCCGGCGGCGGTCAAGGAATACCTGCGCGCCAAGCTGGCCGGCTTCGAGCATGAGGTGTTCGCGGTGCTGTTCCTCGATACACAGCATCGCCTGATCGAGTATGCCGAGATGTTCCGCGGCACCATCGACTCAGCCGAAGTGCATCCGCGCGAAGTGGTCAAGGCGGCCCTGCGGCGCAACGCGGCGGCAGTCATCATTTCGCACAATCATCCGAGCGGGAATCCCGAGCCGAGCAGTGCCGACAAGATGCTGACCCAGCGGCTCAAGGAGGCGCTGGCGCTGGTGGATGTCCGCACGCTGGATCACATCATCGTGGCAGGTGGCACC
PROTEIN sequence
Length: 159
MSQLSFSSFNASLMVRDAQGRYLLATADQILEAARQAIEHKMQRGASFSSPAAVKEYLRAKLAGFEHEVFAVLFLDTQHRLIEYAEMFRGTIDSAEVHPREVVKAALRRNAAAVIISHNHPSGNPEPSSADKMLTQRLKEALALVDVRTLDHIIVAGGT