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NECEvent2014_5_7_scaffold_5026_1

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(359..835)

Top 3 Functional Annotations

Value Algorithm Source
Translocation protein in type III secretion n=68 Tax=Pseudomonas RepID=E3A1T8_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 313
  • Evalue 1.10e-82
  • rbh
translocation protein in type III secretion similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 313
  • Evalue 3.00e-83
  • rbh
Translocation protein in type III secretion {ECO:0000313|EMBL:CDH77976.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 313
  • Evalue 1.50e-82

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGAGCCTGGCGCTGCTGTTGCGTGTCCGACGCCTGCGCCTGGACCGGGCCGAGCGCGCCCAGGGCCGCCAATTGCTACGGGTTCGCGCCGCGGCGCAGGAACACACCGAGCGCCAGGCGGCGCAACGGGATTACCGCGACTGGCGACTGGCCGAAGAGCAACGGCTGTTTCTCGCCTGCCAGGCGGCCATGCTCGACCGCCGGCGCCTGGAAGCCTGGCAGCAGCAGGTAGGGCTGCTGCGGGAAAAGGAAGCCGGCCTGGAACAGGACTGCGCCGAGGCCGCGCAGCGCCTCGAAGGGGAGCGCGAGCGCCTGCGGCAGTGCCGGCGAGAGCTGCTGGAACGCCAGCGGCAACTGGAGAAGTTCGCCGAACTGGAGCGCCACGTCGACGCCGAGCGCCAGGGGCTGCGCGAACGCAGCGAGGAAGGCGAACTGGAAGAATTCACCCGCCACGAGACCTGGCCATGCTCAAGCTGA
PROTEIN sequence
Length: 159
MSLALLLRVRRLRLDRAERAQGRQLLRVRAAAQEHTERQAAQRDYRDWRLAEEQRLFLACQAAMLDRRRLEAWQQQVGLLREKEAGLEQDCAEAAQRLEGERERLRQCRRELLERQRQLEKFAELERHVDAERQGLRERSEEGELEEFTRHETWPCSS*