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NECEvent2014_5_7_scaffold_5241_1

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(1..450)

Top 3 Functional Annotations

Value Algorithm Source
ligD; ATP-dependent DNA ligase (EC:6.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 150.0
  • Bit_score: 321
  • Evalue 1.40e-85
Multifunctional non-homologous end joining protein LigD {ECO:0000313|EMBL:BAR68071.1}; EC=6.5.1.1 {ECO:0000313|EMBL:BAR68071.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 150.0
  • Bit_score: 321
  • Evalue 6.90e-85
DNA ligase D n=2 Tax=Pseudomonas aeruginosa RepID=U9F211_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 150.0
  • Bit_score: 321
  • Evalue 4.90e-85

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGCCCAGCAGCAAGCCGCTCGCCGAGTACGCCCGCAAGCGCGATTTCCGCCAGACCCCGGAGCCCAGCGGCCGCAAGCCTCGCAAGGACAGCACCGGGCTGCTCCGCTATTGCGTCCAGAAGCACGACGCCAGCCGCCTGCACTACGACTTCCGCCTGGAGCTGGATGGCACCCTGAAGAGCTGGGCGGTGCCCAAGGGGCCGTGCCTCGACCCGGCGGTGAAGCGGCTCGCGGTGCAGGTTGAGGACCATCCGCTGGACTATGCCGATTTCGAAGGCAGCATCCCCCAGGGGCACTACGGCGCCGGCGATGTCATCGTCTGGGACCGAGGCGCCTGGACGCCTCTGGACGATCCGCGCGAGGGCCTGGAAAAGGGCCATCTCAGCTTCGCCCTGGATGGCGAGAAACTCTCCGGGCGTTGGCACCTGATCCGCACCAACCTGCGCGGC
PROTEIN sequence
Length: 150
MPSSKPLAEYARKRDFRQTPEPSGRKPRKDSTGLLRYCVQKHDASRLHYDFRLELDGTLKSWAVPKGPCLDPAVKRLAVQVEDHPLDYADFEGSIPQGHYGAGDVIVWDRGAWTPLDDPREGLEKGHLSFALDGEKLSGRWHLIRTNLRG