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NECEvent2014_5_7_scaffold_4116_1

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(3..500)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion outer membrane protein PscC n=7 Tax=Pseudomonas aeruginosa RepID=G2LA31_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 333
  • Evalue 1.40e-88
pscC; Type III secretion outer membrane protein PscC precursor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 333
  • Evalue 3.90e-89
Type III secretion outer membrane protein PscC {ECO:0000313|EMBL:AHW71813.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 333
  • Evalue 1.90e-88

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGCGCCGCCTGCTGATCGGCGGACTGCTGGCGCTGCTGCCTGGCGCGGTCTTGCGCGCGCAGCCGCTGGACTGGCCCAGCCTGCCTTACGACTATGTGGCGCAGGGCGAAAGCCTGCGCGACGTGCTGGCCAACTTCGGCGCCAACTACGATGCCTCGGTGATCGTCAGTGACAAGGTCAACGACCAGGTCAGCGGTCGCTTCGACCTGGAAAGCCCGCAGGCCTTCCTGCAGTTGATGGCCTCCCTCTACAACCTCGGCTGGTACTACGACGGCACCGTGCTGTACGTATTCAAGACCACCGAGATGCAATCGCGGCTGGTGAGGCTGGAGCAGGTCGGCGAGGCCGAGCTGAAGCGCGCGCTGACCGCCGCCGGTATCTGGGAGGCGCGCTTCGGCTGGCGTGCCGACCCTTCCGGGCGACTGGTGCACGTGTCCGGTCCGGGGCGCTATCTCGAACTGGTCGAGCAGACCGCCCAGGTGCTGGAGCAGCAATAC
PROTEIN sequence
Length: 166
MRRLLIGGLLALLPGAVLRAQPLDWPSLPYDYVAQGESLRDVLANFGANYDASVIVSDKVNDQVSGRFDLESPQAFLQLMASLYNLGWYYDGTVLYVFKTTEMQSRLVRLEQVGEAELKRALTAAGIWEARFGWRADPSGRLVHVSGPGRYLELVEQTAQVLEQQY