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NECEvent2014_5_7_scaffold_5940_1

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 3..296

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer ATPase TrbE n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WC12_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 97.0
  • Bit_score: 204
  • Evalue 5.70e-50
type IV transport system protein VirB similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 97.0
  • Bit_score: 188
  • Evalue 6.90e-46
CagE, TrbE, VirB component of type IV transporter system, conserved region protein {ECO:0000313|EMBL:ADV00563.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 97.0
  • Bit_score: 188
  • Evalue 3.40e-45

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
GAGATCGTCGCCACCGCGCAGCCCAAGCGCGACTACTACTACCAATCCCGCCTCGGCAACCGCCTGTTCGACCTCGACCTCGGGCCGGCGACGCTGGCCTTCGCGGGCGCTTCCACGCCGCAGGACCAGCGCGACATGGATCGCGTGCTGCTGGACGCCGGCGTGCCCGGCTTCGCGAGCGCCTGGCTGCGCCATCGCGGCCTCGATTGGGCGGCAGACCTGCTGCCCTCGTTCCCCGGCCTCGTGCCGGCTTCACCTCGTTTCGCCGACCACCCACAGGAGAACCTGCCATGA
PROTEIN sequence
Length: 98
EIVATAQPKRDYYYQSRLGNRLFDLDLGPATLAFAGASTPQDQRDMDRVLLDAGVPGFASAWLRHRGLDWAADLLPSFPGLVPASPRFADHPQENLP*