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NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_11_16

Organism: NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_plum

partial RP 52 / 55 BSCG 0 / 51 ASCG 12 / 38 MC: 1
Location: 19307..19939

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D687B6 related cluster n=1 Tax=unknown RepID=UPI0003D687B6 similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 210.0
  • Bit_score: 410
  • Evalue 1.10e-111
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succ similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 210.0
  • Bit_score: 410
  • Evalue 1.60e-111
  • rbh
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 211.0
  • Bit_score: 202
  • Evalue 1.30e-49

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Taxonomy

Negativicoccus succinicivorans → Negativicoccus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 633
ATGTTAAAAGAATATTTTCAGGAACTTGCCAAAATTGAATTATTGGATCCCGAAACGGAAGCTTCTTTGTGGCGCGCCTATAAAGAAAAACAGGATCGCGGCGCCCGCCAGACGCTGATCGAGCATTACCAGCCCCTGGTCGTCAAAGAAGCGATGCGTTGGCAGCTGCAGGAAGCGACCTTGCTGGATCTTTTGCAGGAGGGTACCGTCGGCTTGATGGAAGCGGCGGAACGGTATGAACCGGCGCGTTCGGTCGCGTTTTCACTCTTTGCGCGGCACCGCATTCGCGGGCGCATGCTCGATTACATTTATAAAAACGGAACCGATATCCCGGTGGAAGACAGCGCCTGGGCCGAAAGTCGCGCGCAATTCAACAGTCTCGTGACGGAGGCGACGGATGCGTTTGAGGCGGCCGATCGGACGTTTTTGTGGGAAGCGGTGCGTAACGCCGTGCATCGTTTGCCGCCGAAAGAACAGCAGGTGGTGGACGGCATTTACATACAAAATCGTGAGCCGAAAGAGCTGGCGCTCGAATTACAAGTTTCTAAAACTTACATTTATAAATTGCAAAAAACCGGTATACGCCGTTTGCGCGGCATGTTGTCGCGCTTGATGCATGAGCGACGCGAGTAA
PROTEIN sequence
Length: 211
MLKEYFQELAKIELLDPETEASLWRAYKEKQDRGARQTLIEHYQPLVVKEAMRWQLQEATLLDLLQEGTVGLMEAAERYEPARSVAFSLFARHRIRGRMLDYIYKNGTDIPVEDSAWAESRAQFNSLVTEATDAFEAADRTFLWEAVRNAVHRLPPKEQQVVDGIYIQNREPKELALELQVSKTYIYKLQKTGIRRLRGMLSRLMHERRE*