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NECEvent2014_5_8_scaffold_4788_3

Organism: NECEvent2014_5_8_UNK

partial RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: comp(1209..1577)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LYV2_CLOB8 similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 118.0
  • Bit_score: 84
  • Evalue 1.10e-13
RNA polymerase sigma-70 similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 118.0
  • Bit_score: 84
  • Evalue 3.00e-14
RNA polymerase sigma-70 {ECO:0000313|EMBL:ABR35532.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain AT similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 118.0
  • Bit_score: 84
  • Evalue 1.50e-13

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Taxonomy

Clostridium beijerinckii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 369
TCTATTAATGCTATAAAAAATAACTTCAAATATATACTTAGGAAATCTACTCAAAGGGATGACCATGAGGGCTTGCTCTCTGGTGATATTTCTACAGATCTAGAATCTCTTCTTAAACCTGAAGAATGTCCTTATGAGAAAAAGGAGTCAGACATTATAGATGCTGAACTTATTAAACATGTTTTTAAAGGGCTAAATAAAGATGAACTTGAATTAGTTAACCTTGTGGTTTTTGAGGAACATACAGTTAGAGAATATGCTGCATTTAAAAATCTTAACTACTCCACTGCTGTAAAGAAAAAGAAATCAGCATTAGATAAAATGAAAATTCCTTTTAATGAATTTATAAATAATACTTATAATGTTTAA
PROTEIN sequence
Length: 123
SINAIKNNFKYILRKSTQRDDHEGLLSGDISTDLESLLKPEECPYEKKESDIIDAELIKHVFKGLNKDELELVNLVVFEEHTVREYAAFKNLNYSTAVKKKKSALDKMKIPFNEFINNTYNV*