ggKbase home page

NECEvent2014_5_8_UNK

In projects: NECEvent2014_5_8
Displaying items 151-200 of 213 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_2570 175_008_scaffold_2570
Species: Clostridium celatum (50%)
2 3226 bp 30.87 29.25 83.70
NECEvent2014_5_8_scaffold_5188 175_008_scaffold_5188
Species: [Clostridium] sordellii (50%)
2 1421 bp 26.60 13.19 53.20
NECEvent2014_5_8_scaffold_6388 175_008_scaffold_6388
Species: Enterobacter cloacae (50%)
2 1064 bp 45.30 4.37 37.22
NECEvent2014_5_8_scaffold_5963 175_008_scaffold_5963
Species: Finegoldia magna (100%)
2 1173 bp 34.19 1.79 79.80
NECEvent2014_5_8_scaffold_4885 175_008_scaffold_4885
Species: Enterobacter sp. MGH 14 (50%)
2 1538 bp 54.16 4.10 64.37
NECEvent2014_5_8_scaffold_6654 175_008_scaffold_6654
Species: Enterobacter sp. MGH 14 (50%)
2 1009 bp 56.89 3.42 100.50
NECEvent2014_5_8_scaffold_4381 175_008_scaffold_4381
Species: Klebsiella oxytoca (50%)
2 1755 bp 42.17 8.03 39.83
NECEvent2014_5_8_scaffold_4894 175_008_scaffold_4894
Species: Thermaerobacter marianensis (50%)
2 1533 bp 73.39 4.89 100.59
NECEvent2014_5_8_scaffold_6157 175_008_scaffold_6157
Species: Enterobacter cloacae (50%)
2 1119 bp 51.92 6.17 77.48
NECEvent2014_5_8_scaffold_5730 175_008_scaffold_5730
Species: Halobacillus halophilus (50%)
2 1239 bp 23.81 4.48 99.03
NECEvent2014_5_8_scaffold_2098 175_008_scaffold_2098
Species: Streptococcus parauberis (50%)
2 4075 bp 33.50 21.06 24.00
NECEvent2014_5_8_scaffold_6175 175_008_scaffold_6175
Species: Enterobacter asburiae (50%)
2 1115 bp 54.35 13.99 87.17
NECEvent2014_5_8_scaffold_3130 175_008_scaffold_3130
Species: Enterobacter cloacae (50%)
2 2612 bp 57.04 4.94 87.06
NECEvent2014_5_8_scaffold_4412 175_008_scaffold_4412
Species: Enterobacter cloacae (100%)
2 1741 bp 54.68 6.38 87.54
NECEvent2014_5_8_scaffold_5497 175_008_scaffold_5497
Species: Clostridium saccharobutylicum (100%)
1 1310 bp 25.73 7.21 9.85
NECEvent2014_5_8_scaffold_4939 175_008_scaffold_4939
Species: Peptoclostridium difficile (100%)
1 1514 bp 71.60 5.35 99.87
NECEvent2014_5_8_scaffold_6199 175_008_scaffold_6199
Species: Enterobacter sp. 35683 (100%)
1 1109 bp 55.00 3.79 87.11
NECEvent2014_5_8_scaffold_5001 175_008_scaffold_5001
Species: Enterobacter cloacae (100%)
1 1489 bp 61.18 3.22 99.93
NECEvent2014_5_8_scaffold_3921 175_008_scaffold_3921
Species: Caldicellulosiruptor bescii (100%)
1 2012 bp 30.72 28.55 88.27
NECEvent2014_5_8_scaffold_6462 175_008_scaffold_6462
Species: [Clostridium] sordellii (100%)
1 1052 bp 30.32 2.85 99.81
NECEvent2014_5_8_scaffold_4194 175_008_scaffold_4194 1 1849 bp 48.89 356.71 4.06
NECEvent2014_5_8_scaffold_6477 175_008_scaffold_6477
Species: Clostridium sp. CAG:265 (100%)
1 1049 bp 23.16 8.15 82.36
NECEvent2014_5_8_scaffold_3430 175_008_scaffold_3430
Species: Clostridium perfringens (100%)
1 2336 bp 27.35 5.78 97.60
NECEvent2014_5_8_scaffold_5799 175_008_scaffold_5799
Species: Clostridium colicanis (100%)
1 1219 bp 37.49 23.50 98.69
NECEvent2014_5_8_scaffold_1649 175_008_scaffold_1649
Species: [Clostridium] spiroforme (100%)
1 5137 bp 30.74 21.72 98.58
NECEvent2014_5_8_scaffold_5804 175_008_scaffold_5804
Species: Anaerococcus vaginalis (100%)
1 1217 bp 31.80 2.83 83.32
NECEvent2014_5_8_scaffold_6515 175_008_scaffold_6515
Species: [Clostridium] sordellii (100%)
1 1040 bp 31.54 2.88 87.12
NECEvent2014_5_8_scaffold_6523 175_008_scaffold_6523
Species: Enterobacter sp. MGH 14 (100%)
1 1038 bp 42.49 7.37 70.52
NECEvent2014_5_8_scaffold_2713 175_008_scaffold_2713 1 3081 bp 62.93 5.36 99.90
NECEvent2014_5_8_scaffold_5855 175_008_scaffold_5855
Species: Salmonella enterica (100%)
1 1198 bp 47.66 280.84 83.89
NECEvent2014_5_8_scaffold_4779 175_008_scaffold_4779
Species: Escherichia coli (100%)
1 1583 bp 41.31 6.06 57.99
NECEvent2014_5_8_scaffold_6041 175_008_scaffold_6041
Species: [Clostridium] papyrosolvens (100%)
1 1151 bp 50.91 378.19 13.55
NECEvent2014_5_8_scaffold_5615 175_008_scaffold_5615
Species: Bacillus cereus (100%)
1 1278 bp 22.38 5.05 91.08
NECEvent2014_5_8_scaffold_6309 175_008_scaffold_6309
Species: Enterobacter sp. 35683 (100%)
1 1079 bp 57.46 5.70 80.07
NECEvent2014_5_8_scaffold_5123 175_008_scaffold_5123
Species: [Clostridium] hylemonae (100%)
1 1444 bp 52.29 5.51 99.93
NECEvent2014_5_8_scaffold_5893 175_008_scaffold_5893
Species: Raoultella ornithinolytica (100%)
1 1189 bp 56.43 5.17 99.92
NECEvent2014_5_8_scaffold_6326 175_008_scaffold_6326
Species: Enterobacter cloacae (100%)
1 1076 bp 59.57 5.99 99.81
NECEvent2014_5_8_scaffold_3793 175_008_scaffold_3793
Species: Klebsiella pneumoniae (100%)
1 2095 bp 54.51 5.87 86.78
NECEvent2014_5_8_scaffold_6333 175_008_scaffold_6333
Species: Parvimonas micra (100%)
1 1075 bp 28.37 2.79 64.19
NECEvent2014_5_8_scaffold_2007 175_008_scaffold_2007
Species: Acinetobacter baumannii (100%)
1 4240 bp 33.82 4.92 90.85
NECEvent2014_5_8_scaffold_5907 175_008_scaffold_5907
Species: Streptococcus equi (100%)
1 1187 bp 38.67 2.78 57.88
NECEvent2014_5_8_scaffold_3300 175_008_scaffold_3300
Species: Klebsiella pneumoniae (100%)
1 2448 bp 40.48 39.71 52.57
NECEvent2014_5_8_scaffold_4583 175_008_scaffold_4583
Species: Enterobacter cloacae (100%)
1 1664 bp 54.75 5.50 99.88
NECEvent2014_5_8_scaffold_6105 175_008_scaffold_6105
Species: Klebsiella pneumoniae (100%)
1 1131 bp 59.15 9.68 98.14
NECEvent2014_5_8_scaffold_6625 175_008_scaffold_6625
Species: Escherichia coli (100%)
1 1016 bp 51.77 8.42 79.43
NECEvent2014_5_8_scaffold_5180 175_008_scaffold_5180
Species: [Clostridium] sordellii (100%)
1 1425 bp 35.58 3.79 99.79
NECEvent2014_5_8_scaffold_3081 175_008_scaffold_3081
Species: Leclercia adecarboxylata (100%)
1 2665 bp 59.32 73.28 99.96
NECEvent2014_5_8_scaffold_5699 175_008_scaffold_5699
Species: Klebsiella oxytoca (100%)
1 1248 bp 62.50 114.66 100.00
NECEvent2014_5_8_scaffold_5700 175_008_scaffold_5700
Species: Peptoclostridium difficile (100%)
1 1247 bp 57.82 4.81 98.64
NECEvent2014_5_8_scaffold_4113 175_008_scaffold_4113
Species: Escherichia phage HK639 (100%)
1 1887 bp 54.58 4.45 100.00
Displaying items 151-200 of 213 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.