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NECEvent2014_5_8_scaffold_3690_1

Organism: NECEvent2014_5_8_Eggerthella_1_3_5FAA-rel_64_6

near complete RP 50 / 55 MC: 4 BSCG 43 / 51 ASCG 10 / 38 MC: 1
Location: comp(1..648)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=4 Tax=Bacteria RepID=C8WIZ6_EGGLE similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 216.0
  • Bit_score: 426
  • Evalue 2.00e-116
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 216.0
  • Bit_score: 426
  • Evalue 5.70e-117
Sigma-70 region 2 {ECO:0000313|EMBL:EGC90557.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 216.0
  • Bit_score: 426
  • Evalue 2.80e-116

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Taxonomy

Eggerthella sp. HGA1 → Eggerthella → Eggerthellales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGCATCGCGAAGAATTATCGAAAGAAGCGCAGCTCGACCTGGTGGACAAGGCCATCGTAGGCGACGGCCAGGCGTTGGAGGAACTGCTGCGGTCCACGAGCGGGCTCGTGTTCAACCTTGCGCTCAGGTTCCTGGGCACCGTCCACGACGCCGAGGACGCGAGCCAGGAGATCGCGGTCAAGATCATGACCCGGCTCTCGACGTTTCGCAAGGAGAGCGCGTTCTCCACATGGGTGTACCGCATCGCCGTGATCCACCTCAAGGACTGCCGCACGCATCAGTTCGCGAACGCCCCGTTCAGCTTCGAGATGTACGGGGCCGACATCGTCGACGAGCGCGCGAAGGACGTCCCCGACCTGTCCGAAGGGGTCGACCGCGGCATGCTGGCGCGTGAGCTGAAGCTGTCGTGCACGAACGTGATGCTGCAATGCCTCGACGCCGACAGCCGCTGCGCCTACGTGCTGGGCACCATGTTCAAGGTGGACAGCTCCACCGCGGCCGACGTGCTGGGCATCACGCCCGAGGCGTACCGCCAGCGCCTGTCGCGCGCCCGCAAGACGGTCGCCGAGTTTTTGGGCGCGTACTGCCAGCACGGCGGCGCGGAGACGTGCTCGTGCGAGCGGCGCGTGAACTTCGCCATCGCCACG
PROTEIN sequence
Length: 216
MHREELSKEAQLDLVDKAIVGDGQALEELLRSTSGLVFNLALRFLGTVHDAEDASQEIAVKIMTRLSTFRKESAFSTWVYRIAVIHLKDCRTHQFANAPFSFEMYGADIVDERAKDVPDLSEGVDRGMLARELKLSCTNVMLQCLDADSRCAYVLGTMFKVDSSTAADVLGITPEAYRQRLSRARKTVAEFLGAYCQHGGAETCSCERRVNFAIAT