ggKbase home page

NECEvent2014_5_8_scaffold_4444_1

Organism: NECEvent2014_5_8_Eggerthella_1_3_5FAA-rel_64_6

near complete RP 50 / 55 MC: 4 BSCG 43 / 51 ASCG 10 / 38 MC: 1
Location: 2..139

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=1 Tax=Clostridium difficile F501 RepID=T4BD56_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 45.0
  • Bit_score: 91
  • Evalue 1.90e-16
Helix-turn-helix family protein {ECO:0000313|EMBL:EQI08012.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 45.0
  • Bit_score: 91
  • Evalue 2.60e-16
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 45.0
  • Bit_score: 88
  • Evalue 4.50e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 138
CACGAGCTCGCGCAGCGGTGCGGCATGAAGCAGAGCGCGTTCGCCCGGCTGGAGTCCGGCAACGCCAACCCCACGCTCGAAACGCTCAAGCGCGTGGCCGAGGGTCTCGGCAAGCAGCTGCGCATCAGTTTCGTCTAG
PROTEIN sequence
Length: 46
HELAQRCGMKQSAFARLESGNANPTLETLKRVAEGLGKQLRISFV*